FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length105
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCAGCACGATCCAATCTCGCATACGTCATTCCAATGAATGCTAGGAT15.263157894736842No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTACACTACAACTCGTCACCAT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATAAGATGATTCTATCTTGAGATGC15.263157894736842No Hit
GTGCCAGCACGATCCAAACTCGCATAAGTCAAATGGGTACACACCTGGCT15.263157894736842No Hit
GTGTGCCAGCACGATCCAATCTCGCATCGGACCTTATTCTATCTTGAGAT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAAATTGAGTGAATACGTTTGAAAGA15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAAGTCGAGGCTTGATGGTGCTTGTC15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATACAAAGATGTTCCTCTTCACTCTCT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATTTAAATACTTGATGGTGCTTGTC15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAGGTACAATTTCAGGAAGTCATAGA15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAACAATACAACCTTCAAAACACTAA15.263157894736842No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTACATCCTTATTGATGGAGTA15.263157894736842No Hit
GTGTGCCAGCACGATCCAATCTCGCATAGCTAGTACAACGTGGAGAAGGT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAAAAAAACGCACAGAACATTCCCGG15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATATGTTTCTTTCTCCTGGAAGCAA15.263157894736842No Hit
TGTGCCAGCACGATCCAATCTCGCATAGAACCACACCTTGTTATCAAAAT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATTTCTAGCTGAATCTAGTTTGGAG15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATACTTAGAACGATCTAAGCAGCCGAG15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAGTAGCAATCTTGATGGTGCTTGTC15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)