FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length105
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGACAGCACGATCCAATCTCGCATACGTGCATTCCTTCAGGAGCTGCA15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATATATTCCGGGCTGCACAGCACCA15.263157894736842No Hit
TGTGCCAGCCCGATCAAATCTCGTATATTACTGCACTTGAAGCTTGTCTT15.263157894736842No Hit
TGTGCCAGCACGATCCAATCTCGCATACTACTTCCCAGATCTTTTCTTCT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAGTTGAAAGCTTGATGGTGCTTGTC15.263157894736842No Hit
TGTGCCAGCACGATCCAATCTCGCATATCATATTGAACCTCTAAAACTCT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATACATTTTGCTGGCCCCTGTCATCTT15.263157894736842No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATCTTCAGCTAATCTCCCTAC15.263157894736842No Hit
CCGATCTTTCTGCCTCCTGTGCCAGCACGATCCAATCTCGCATATGTCGA15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATCAGTAATCAACCAGGTTGACAAC15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATACCAGTAATTTCAGGAAGTCATAGA15.263157894736842No Hit
GGTGCCAGCACGATCCAATCTCGCATAGATCATCAGAATTGCGAAGATCC15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAAAAAGAAACAGTTCCAGGATGCTC15.263157894736842No Hit
TGTGCCATAAGTATACAATCTCGAATAAAACAATTAATAAAATATTTTTT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGAGACAAAGGTGTGTGTCCT15.263157894736842No Hit
TGTGCCAGCCCGATCAAATCTCGCATAATAACAGCGTTGCTCACTATTTT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATACATATTATCCTATGTCTTCATCTT15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATAGTTCTTCCCCATCTCTACAGGAAA15.263157894736842No Hit
GTGCCAGCACGATCCAATCTCGCATATTTGGATGAAGGTGCCACTGCAGG15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)