FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174
Sequences flagged as poor quality0
Sequence length105
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCACCAGAACGGAAAACATCCTTCATAGAAATTTCACGCGGCGGCAA2011.494252873563218No Hit
ATTTCACGCGGCGGCAAGTTGCCATACAAAACAGGGTCGCCAGCAATATC2011.494252873563218No Hit
TGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGACTCAA169.195402298850574No Hit
ATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAA126.896551724137931No Hit
CTTGATGCGGTTATCCATCTGCTTATGGAAGCCAAGCATTGGGGATTGAG116.321839080459771No Hit
GTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTA105.747126436781609No Hit
AAATTAGAGCCAATACCATCAGCTTTACCGTCTTTCCAGAAATTGTTCCA31.7241379310344827No Hit
ATTTCACGCGGCGGCAAGTTGCCACACAAAACAGGGTCGCCAGCAATATC21.1494252873563218No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCACAAGACGGCGAGAACATGGT10.5747126436781609No Hit
GTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCTTAATAGCTAAAACCACGAACACCCT10.5747126436781609No Hit
AAATTAGAGCCAATACCATCAGCTCTACCGTCTTTCCAGAAATTGTTCCA10.5747126436781609No Hit
ATTTCACGCGGCGGCAAGTCGCCATACAAAACAGGGTCGCCAGCAATATC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAACATATCCAATGCTTAAACATCC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTAACATTTCGGACATGACCAGG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATAACGAACCCATTTTTATTTTCG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGACTTTCGAATCAAGCTTCAAG10.5747126436781609No Hit
TATGCCAGCACGATCCAATCTCGCATACCAGGGGGTAGCTTCGGCCACAA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAATAATGCAGCACGAACATTGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCTCCTCCCCCCTTTCTTCTCTCCCCTTTT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATGACGTCACCTTCCCCTGCTTGA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTCCATACCCACCCCTACCTTG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGAACAAAATCAGACGCTGCAGGA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATCATTACCAATCACGACAACCCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTCGAGCACTGCTTCGGAAGGC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAATAGCAGGCTGCATCCAGGGGAC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAGTATGAAGAGCACCCGGCA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATGCAGCGAATAATGGGGATGG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTCATCAGGTGGATGCCGATGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTTATTTTGCACTGGAATTTGC10.5747126436781609No Hit
TGCAACTGGACAATCAGAAAGAGACTGCCGAGATGCAAAATGAGACTCAA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAACATCAGACGGCGAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTACGTATTCTGGAGGGAGGTAG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTACTCCCCTTAAGGATGGGAA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAACAAAAATCGGCGAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTACTAGTCGCCACGAACACCCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCATGAGGCCAAGAAGTAGATGA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGAAAAGCAACCACGAAAACGCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACCAAGCGTCGTTGACTTGGC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATATCCTTCTTGCAGATCTATCTG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTTCTACCGGCGATAACACGGT10.5747126436781609No Hit
GAATCACCAGAATGGAAAACATCCTTCATAGAAATTTCACGCGGCGGCAA10.5747126436781609No Hit
TGTGACAGCACGATCCAATCTCGCATAGCATATCTCTTCAATAACATTTT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAGGTACCGGCGAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATATTCTCTAACCACAAAACCTCT10.5747126436781609No Hit
TGTGCACGCCCTCTCCCCTCTCTCCTCCCACAAAACGGCGCTAACATGTT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTACACACTTCCGAAGCTCACT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGAGAATGCGCCTCGAACACGCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAAATCGATTCTCTGCAGTGC10.5747126436781609No Hit
ATTTCACGCGGCGGCAAGTTGCCCTACAAAACAGGGTCGCCAGCAATATC10.5747126436781609No Hit
TGTGCGCTCCCTCTCCCCTCTCTCTTCCCACATCTCTGCTCTAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATATTCACGGGTCTTGGGCAGGGG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTAGATAAACCACGAAAACCCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGATAACCCTGCATCCAGGTGCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTAGGTCGCGGCGGTTACTTGGG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACATAATTAAGTGGCTGCAATAAC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTGTTACGCCTTTGGAGAGGGG10.5747126436781609No Hit
GAATCACCAGAACGGAAAACATCCTTCATAGAAATTTCACGCGGCGGCCA10.5747126436781609No Hit
CTTGATGCGGTTATCCATCTGCTTATGGAAGCCAAGCATTGGGGATTGCG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATTATAAGTCCACAATGATCATGG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACAACGAGTTAGGAGTAGGCAATG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGTATTGACGGCGAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCAAGATAAGGTCCCCTGCCCAA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTAAATGGAACCACGAAAACCCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATCAATAGCGTCACTAAAAGCATC10.5747126436781609No Hit
TGTGCCAGCACGATCCCATCTCTCCTCCCCTCTTCCCTTTCCCCCCCCCC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGATATCTTTTGCAGTGATCCAC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATCACCTCCCTGCGCGAACATCGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTATTATTTCAGGAAGCCATAG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTTCACCTTGCTGGTTGTGCTC10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTGATAAAAAGTACTTACTCAT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATCAACTGTGGTTTACCAGCACCA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCAAATCACGGCGAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTCTTGAAGGTCCCCAGCCCAA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTTTTATCTGATGTTCCGGGTT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCACCAATTCCATCGAACTGCTG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACATCCAAACGGCTTCCAAATCCA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTACTCGCGGCGAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTATATCCAGCAAGAACATGGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAATTCAGACTGAATTTCCTA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATTATCTGCCACCAGCTCCGCTGT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATGATGTGTATCTCACCGGATGAT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATATGACATCCGAAGCAAGCCTGAAG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACCAGACATGGCCTTGAGGTG10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATACAACGAGAGGTGGATAACACCCT10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATAGAATTTCGCTCCCCTCCTCCATG10.5747126436781609No Hit
GAATCACCAGAACGGAAAACATGCATCATAGAAATTTCACGCGGCGGCAA10.5747126436781609No Hit
TGTGCCAGCACGATCCAATCTCGCATGTTACAAGTCGGCAAGAACATGGT10.5747126436781609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)