FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length105
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCCAGCACGATCCAATCTCGCATAAAAAGAAACCCTGCCTTTTCAGG15.0No Hit
TGTGCCATCACGATCCAATCTCGCATACGTCCACCCCTCATGAGCATGTG15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTGCTCAGAATTCTGTCCCAGT15.0No Hit
TGTGCCATCACGATCCAATCTCGCATACCAGCAATAGGCGAGAACATGGT15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGAAATTGCCGCTTCTGTATGGC15.0No Hit
AGCACGATCCAATCTCGCATATAACGAAAAACCACGAAAACCCTCACTCG15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTACGAAAAACCCACAGCTGCAC15.0No Hit
AGCACGATCCAATCTCGCATATCAACTTTCAGGAAGATATGTCTCACCTG15.0No Hit
TGTGCCAGCACGATCCATTCTCGCATAAAATGAGTACCTTCTGTGTCTGC15.0No Hit
CTTGCCATCACTATGCCCTCTCTCCTCCTCACTGTTTGAAACTCACCTCT15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATTTACCTAGAATAACTGCAT15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCATTAAAGGACTCAATGGCCCT15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTTCTGCTTCTCCAGTTCTCTG15.0No Hit
TGTGCCAGCACGATCCAATCGCGCATAGCTCGTCAATGCCACATACCGGG15.0No Hit
TTTTCCAGCACGATCCAATCTCGCATATTTCCATTCCAGCCCCTCCCCAA15.0No Hit
GGAGACAGCAAGAGAGAAGAGAGCAGAAAGGAGGAAAGGAAGATGGGAGG15.0No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTAGTATCCGCCGAAAACCTTGA15.0No Hit
AATCTCGCATATGATCTCCGGTGGTTGAAGGAAAACAGTCCAAATTTACA15.0No Hit
AATCTCGCATAAATTTTAGCTAGAGTCTTGGACACTGATCTTCCCACTTG15.0No Hit
AATCTCGCATACCAGAAACACTTCTCACCCTTCTTACAAATATGGCCGCC15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)