FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1496
Sequences flagged as poor quality0
Sequence length105
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTATAGACTCC30.2005347593582888No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTATTCAGCTG30.2005347593582888No Hit
GTGCCAGCACGATCCAATCTCGCATAGCTTGAAGCACCAGTATTTTCTCA20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGGGTATAGACTCC20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAGTTGCTCGAGTGGAGAATGTCAGT20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATATTTGTATGCTGCTGGCGTGTCTCC20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAACTCCATAGGTCGTGGAAAGCACG20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAGCTGATCTCTGGCACAAATTTAAG20.1336898395721925No Hit
CTGTGCCAGCACGATCCAATCTCGCATAAAATGTCAAAGTGATTCAGCCA20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAGCACTTTTTTGTCCCTGCACTGCC20.1336898395721925No Hit
CTGTGCCAGCACGATCCAATCTCGCATATTACTAGGTAGATTCATGGATG20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATATGACCTTCAGAAAACAGGGATTTG20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATACACGAAGCAGGAAGGGGAGTTCTG20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAACAGGTCCGGTGGTTGAAGGAAAA20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTGGAATTGGA20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATATATGAATACCTTCAGGAGCTGCAT20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATACAAGATCTGAAGGGTGAAATATTC20.1336898395721925No Hit
GTCCAGCACGATCCAATCTCGCATACATACAACAGCTGCTTCGACAAGGC20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATACTTAAAATTCCCCTTGCTCTCTTT20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATACAAACACTCAACATACAAACCTCC20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATATATGGACTAGGAGACACTGACAAG20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATATCTCCTTAAGGTCCCCAGCCCAAC20.1336898395721925No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTACCATTTGC20.1336898395721925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)