FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences357572
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTAGGACA5110.14290828140905887No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTACAAGC4730.13228105108901145No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTCCTGAA4250.11885718121105679No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTTCTAGT4150.11606054165314958No Hit
TACGTGCCAGCACGCGGCTGAGCTCCCGCAGGAAGTTATCTCGTATGCCG3700.1034756636425671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)