Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00008066402 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 341588 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ACGTGCCAGGCTGGGTATTCTAGAAACTTATCTCGTATGCCGTCTTCTGC | 2374 | 0.6949892853378924 | RNA PCR Primer, Index 10 (96% over 26bp) |
ACGTGCCAGCACGATCCAATCTCGCATATTATCTCGTATGCCGTCTTCTG | 935 | 0.273721559305362 | RNA PCR Primer, Index 44 (96% over 25bp) |
ACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTAGGACAC | 551 | 0.16130543227513847 | No Hit |
ACGTGCCACCTGGGGAGCGTTATCTCGTATGCCGTCTTCTGCTTGAAAAA | 476 | 0.13934915746454793 | Illumina PCR Primer Index 5 (96% over 27bp) |
ACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTCCTGAAT | 459 | 0.1343724018408141 | No Hit |