FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6786
Sequences flagged as poor quality0
Sequence length105
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGCTTTAGGTGTCTGTAAAACAGGTGCCGAAGAAGCTGGAGTAACAGAA220.3241968759210138No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTACAAGCTC90.1326259946949602No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)