FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52
Sequences flagged as poor quality0
Sequence length105
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCCAGCACGATCCAATCTCGCATACATCGTGCCCGCAGATGTAGTAA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATTAATCTGGGACACAGATAA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACCTCGCATCTTTTTTCGCCC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATGTTCATACTTACTTGAGATATA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATCACAAAAGATGGAAGCCGGCGT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATTAACTGGTCACGCTCTAGTGGC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTCAAGCTCCGTCTCCTCTCTC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCTACAAACTATCTGTTTACCTA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTCTACTAGTTGCGCCCAGCGG11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATAGAACTTGGCCACAGCAAGATGGAT11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATAGAATGAGTCCTCCTAAATTCATTC11.9230769230769231No Hit
TATGTGCCAGCACGATCCAATCTCGCATACCAGAAATCGGCGAGAACATG11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGAGGAGATTCATACATGTTCTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACCATAAACTCGGTTCACCTCAAC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACCATCTATAGCGCTCTAGAAACA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATGTAGTCAGTCTCACCGGGCTCC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATCACGTATTTTCATTTGGAGCTT11.9230769230769231No Hit
TTTTCACTCACGATCCAATCTCGCATATCATCAGGGTGATTATCACGTTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTTTATCTGGGCATCGTTTCAA11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATACCACCACCAACAAGCTGCTTCTCA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATCACCATAGTTCTCACCCAGACC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAGTCACGGCGTGAAGATGGT11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATAAATGGATTTCTGGTGAATGCAAAC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATGGTACGATACTGTAGTGATGCGAA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTTTTGTTCCTGTACTGGCTAG11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTTCACATCTCACCATCTGGAA11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATATTTATAACGTGGACATCTTTGGCA11.9230769230769231No Hit
TTTTCCAGCACTCTCCAATCTCTCATACATTCATTTTTTTCATCTCCTCA11.9230769230769231No Hit
TGTGCCATCACTATCCCATCTCTCCTCCCCTTACCATTTTCTTTCCCCCC11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATAATAGGATATCCCCTTGCTCTCTTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATCAACCTCCTAGCCTCCTCTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAATACTTTGGAATGAACATTCGTG11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATATCAATCATCCCTCAGCTTTGC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGTGATCCAACACGTAGCCAGAT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAGATGTTATGAAGAGACCTTACCT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTTTTATCGACGAGAACTGGAT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAACACCAAGTCTCCTGTAGTCACC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACTAGATGACTTACCCCGCCATTG11.9230769230769231No Hit
GTGCCAGCACGATCCAATCTCGCATAGTTCCTATAACAAGCTGCTTCTCA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCTACATGCAACAAGACCGCCTA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTCATCGCCTCCTGTACCTTTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAACCACGCCTCTTCGTACCTTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATCTGAATTACGCCAACTCGTTCC11.9230769230769231No Hit
CTCGCATAAGTCTTCTCATCTGGTAACCAAAAAGGTGATAAACCTCCCTC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAATACCTTCGTTCTCTGCAGTGCC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAACAGTTACCCGCGAGCACTTGGT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATGTGAACGTTGGTGTATTCGCTT11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACATTGCCATCCCTACAGGAA11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTTCAACTTTCTCGTCACCCTC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAACCAGACATGGCTTTGCGGTC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATATTACTACCACCTCTGCTTGTAAC11.9230769230769231No Hit
TGTGCCAGCACGATCCAATCTCGCATACAACTACCCATGAGTAGGCAATG11.9230769230769231No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)