FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066430

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066430
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89
Sequences flagged as poor quality0
Sequence length105
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAA3033.70786516853933No Hit
ATAGTGCCATGCTCAGGAACAAAGAAACGCGGCACAGAATGTTTATAGGT2831.46067415730337No Hit
ACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGA1921.34831460674157No Hit
TTCTGCGTCATGGAAGCGATAAAACTCTGCAGGTTGGATACGCCAATCAT910.112359550561797No Hit
ACTTTCGGATATTTCTGATGTGTCCTCCTTTTTTCTTTTTAACGCTTGTT11.1235955056179776No Hit
CTTCCTTGATGACTGTAGCACCCTCTGGAGGGATTCTCTCACCACAGCCA11.1235955056179776No Hit
ATAGTGCCATGCTCAGGAACAAAGAAACGCGGCACAGAATGTTTATAGAT11.1235955056179776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)