FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1273
Sequences flagged as poor quality0
Sequence length105
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTATTCAGCT40.3142183817753339No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTACAAGCTC30.2356637863315004No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATCCACTCGGCGAGAACATGGT20.15710919088766695No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAAACCCGGCGAGAACATGGT20.15710919088766695No Hit
TGTGCCAGCACGATCCAATCTCGCATACGAAAAAACGGCGAGAACATGGT20.15710919088766695No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTGCACCCGGCGAGAACATGGT20.15710919088766695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)