FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066435

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066435
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130
Sequences flagged as poor quality0
Sequence length105
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGCACGATCCAATCTCGCATAATTCACATTTCTCTCTTTCCTGAGTA32.307692307692308No Hit
GCCAGCACGATCCAATCTCGCATAACTAGACATTGTTCACGCTGGGCAGT21.5384615384615385No Hit
GCCAGCACGATCCAATCTCGCATAACAGTACCGGTGGTTGAAGGAAAACA21.5384615384615385No Hit
GCCAGCACGATCCAATCTCGCATAAAACAATAAGGGTTGTCAGTAGGGTC10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATAGGAGATCCCAGACTCACCATCAGT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAATAGCACAATTCGCTTTGTCATGATC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAACACAAGGTCCAGAAAAGCTTTGGTG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACATCCTGGTCCTTCTTCCAGAGACTA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGCAAAACCTCAAAACTACAAGGATCT10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTGCAGCCGGCGAGAACATGGG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAATACCAGTTCCCGAGGGAGCGAACCG10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAACTCACGTTTCTTTCACTCA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAACAAATTCCAGGAAGATATGTCTCAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACAAGTTCTAGTGGCTGCAATAAACCA10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAATATAAGGAGAGCCCCACCTGAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATATTATAAAACAAGCTGCTTCTCAGG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATAAATAAGCGGCGAGAACATGGTGCG10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTACATGCACTAGGAAGTATACCCAG10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTTAACCAAGCTTTTACTTAGG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATGACGTTAGGCTTCAATGGCGGCCAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACGATATGACTGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCATCTCGCATATTACTTAGAATGTCCTTCTCCACCAGAA10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATATAAAAAAGGGGCTGGGGTGGCCAT10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATAGAAACTGGCGGCGAGAACATGGTG10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTAGCTCGACTTCCCACACAGCTATC10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTACCTTGTATCATGAGTGCTTCTTC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACTTCGATGTCTGGTGAATGCAAACTA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAATGAACCTCCAGATGGACTCCCTC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGCAAGTAAACGGCGAGAACATGGTGC10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTCCAATCGGCGCGAACATGGT10.7692307692307693No Hit
GCCAGCACGATCCAATGTCGCATATTAAAATCCAGAGGTCGGCTTTGGTT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATATGATTGCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAATATAAGACACAATGGGGTAGGACTG10.7692307692307693No Hit
CGTGCCAGCACGATCCAATCTCGCATACTACTAACCGATTTGATTCTTTA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATATTGTTCCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCTAGTTGGTTTCTTCTTTAATGACT10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTAATTGACCTTTGCTTTCATCC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATAAAAACCCGGCGAGAACATGGTGCG10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTAATGCGGTAGGGATGGATTA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAACTAGAATCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAACTCGTCACAGAGTGTGGAATTCTGT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACGAGTTATGAGTTCTTTGATCTGGAA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCTTTTGATTCCGGGAGTCCCTACAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAATATAAGACCGATGCAAATGATCCCA10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAATAACACGCTCCCATACTCCATG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCACATAAGAGAATACGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGAAGCACAACCGTGTCTTTGGAGGAC10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGAATAACGGATGTAACTTACAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCATTAACTCCAGAAAAGCTTTGGTG10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCAGTAGTCAGCCGTACCTGTGA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAACTTCTCATCTGGTAACCAAAAAG10.7692307692307693No Hit
TGTTCCCTCCCTCTCCCCTCTCTCCTCCCCTCTTCCTTCTCTCCCCTTTT10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATACCAGAAAATCGAAACTCACAGCTC10.7692307692307693No Hit
GTGCCAGCACAATCCAATCTCGCATATGAAAACAAGACATTGAAGCTGAT10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTAGGACATAGAGCCCACCACACCTC10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATAGTAAAAATGATCTAAGCAGCCGAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGTACGTCCCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACGTATTTGTTTCCTTTTTTTGAGCTA10.7692307692307693No Hit
GCTAGCACGATCCAATCTCGCATACGTTGTCGTGGCGTCCGAGTCCATGG10.7692307692307693No Hit
GCCAGCACGATCCACTCTCGCATACATATACGATTTGCTTTGTCAAGATC10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTATAATTATGTTCAGGAAGTCCTAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAAGGTCTCATTCTTGGGATTACCAT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGTAAATTTCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCACTCTCGCATGGTTACTTCCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCACATATTAGTTCGCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GTGCCAGCACGAACCAATCTCGCATACATGAAGCCGGCGAGAACATGGTG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACAACTTTAAATCAGAGGTAACCTTAT10.7692307692307693No Hit
GCCAGCACGATCCACTCTCGCATATCTTTTGATTCCGGGAGTCCCTACAG10.7692307692307693No Hit
GTTTCCCTTCCTCTCCCCTCTCTCCTCTTTCCCCTCTCCCCTTTCTCCCC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAGTACTAGTTCACACTTCCCGCCATT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATTTCCATACCTGCCCCTGCTTGATCT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATTTGTAACAGCCCACCACACCTCAGA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACCTGTTATGTCTCCAATGGGGATTTA10.7692307692307693No Hit
TTTTCCAGCACGACCCAATCTCGCCTACGACGAAACGACATACTCCCGGG10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTAATACAAAGCCTTGGTGGCCCGGG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACTTAAATGTGAATCTTTCAGAATAAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAACAATGAGGACAGGACACCGTCAT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGAAAATGCTGAATCTTTCAGAATGAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAACGACAGAAGGGTGAAATATTCTC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAGACAAGGACCACCCAGATGCCTTTG10.7692307692307693No Hit
GCCAGCACGACCCAATCTCGCATAGCAACAGGAGAAAGCACTTCTTATTG10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATAGAAACAGCAACCACGAAAACCCTC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAACTTGACCTGCTGTGGAGACGCCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATGTGATATCGGCGAGGACATGGTGCG10.7692307692307693No Hit
TGTTCCCTCCCTCTCCCCTCTCTCCTCTCTTCCCCCTTCTTCCCCTTTTT10.7692307692307693No Hit
TTTTCCCTCCCTCTCCCCTCTCTCCTCTTTCGTCCCTCTCCTTTTCCCTT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAAACTCACGGCGAGAACATGGTGCG10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACATCCTAACGGCGAGAACATGGT10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTAACAATTTCTTTGGGGCTGTTTCT10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATATTACAATTTTGAAGTATATCCAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCTTTACTGGAGGAGTTGCAAACAGC10.7692307692307693No Hit
TCCAGCACGATCCAATCTCGCATAATTCTTCACCGCTTCTTCTTGCTGGC10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTACTAGCTCGCAGTGTAATCAGTGT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACCTACAAACAGCAGAGGTGCCAGAAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACTACTAATCCTCCTAACATGTTGAGC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACAAAATCACAGAGATGGGAAGTGAAA10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTACTATTAGGTGGCGTCCGAGTCCA10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTCAACACCTTTCTTGCGGAGA10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTAATAAATGTCGAAAGTTTGCTTGC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATGTGGTAAGTCGTGGAAAGCACGCTC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCAGGAAACGGCGAGAACATGGTGCG10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTATCTATACATGTGTGCCTCGGCTT10.7692307692307693No Hit
TTTTCCAGCACGATCCAATCTCGCCTAAATCGAGTCTTACCGGGCAGTTA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAGTAAAGTAGACATTGAAGCTGATGC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAATTGCTTACTTGGTCATTTCAATATC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACCTAATCGAACCACGAAAACCCTCAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACAAACTCTCAACCAGGTTGACAACAT10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCTATACACACTGTATGATTTTGTGG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCTGTAGGCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATGTCGCATAATTTGTACCAACAGCTGAGCAAGAGG10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATATATCTTTCCGGCGAGAACATGGTG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAAAAATAAGGAAAAAGGAGGAGAGAGA10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATCAGGCTTATCTATGGTATC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAACAAATATCTTAAGGATGGGATATGA10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACAAAATTTAGTGGCTTTGCACAAAGC10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATATCAGCAGATGTGTCTCCGTACTG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAGCAACAGGAGAAAGCACTTCTCATTG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACTTCATTTCTTACCAGGCAGTTAGAG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACGACGAATGTCTTTCTGCAGGAAATC10.7692307692307693No Hit
TGTGCCAGCACGATCCAATCTCGCATAGATTATCTATCTCACCGGATGAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATAACAATACATCATCGCCAGCCGGCTGA10.7692307692307693No Hit
GTGCCAGCACGATCCAATCTCGCATAGAACTTCGGCTGGGACGCGACTGC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATACCAATTCCCTTACATGTCATGTTGAC10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATAATTTATCGGCGAGAACATGGTGCG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCGTATGACAACATGGCGTCCGAGTCCATGG10.7692307692307693No Hit
GCCAGCACGATCCAATCTCGCATATCAGCTTAGTCTTTCTGCAGGAAATC10.7692307692307693No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)