FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91
Sequences flagged as poor quality0
Sequence length105
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCCAGCACGATCCAATCTCGCATAGCACCTCCGGTTGCTCCAACTGT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATATCGACCCGGCGAGAACATGGTG11.098901098901099No Hit
AACGATCCAATCTCGCATATAACAAGATGTTTGATCCTGGGATCTAGAAT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATATCCTTGGGTCTCTGCCCAGCTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATATTAATATGATGTTGAGGCCGT11.098901098901099No Hit
TGTGCCAGCACGATCCAATNNCNCATNNNNNNATTCTNTNACTNNNNNNN11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGACCTTACTTTTTATCCCCATT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACATAAACGTTTGATGGTGTTCGT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACAATAAAGGAGGACAGGACACCGT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAAAACATCAACACATGAAGGTTACT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTCTTCCTGAAGAAACAAAGAT11.098901098901099No Hit
CGCATAGTTCTACGGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAATAAAAGCGAGGGAGAACAGGCT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATCACAAAGTGCAGCTGAAGCTGT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATCATAACAACGACAGCATCAT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACTATTTTCCCCACCAGGCAACCAA11.098901098901099No Hit
AATCTCGCATAAGACTTTAAACCACGAAAACCCTCACTCGCGGCGGGCCG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCTTATTACATATCCTGGCATGCTTCGA11.098901098901099No Hit
TGTGCCAGCGCGATCCAATCTCGCATACATAAATGAACAAGCTGCTTCTC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTGATTCGGTTTACCAGCTCCA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGAATTTTCCTCTCCCTCTCGCCT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTCAAACCGGAGAGAAAAATAT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACAAACATAGTTTAGGAGCCAGGAA11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAGCACATCTCCACAATGATCATGGC11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAGTTATAGATTGGGCAGCGCCTCAC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTCCAGGCATGGCCTTGAGGTT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAATAACTAGGGAGGAGTTGCAAAC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGAACATTCTGTGGCAGACGAAA11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATTACAAAGCGGCGAGAACATGGTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATATAGCTGAGTTTGCCTGGC11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACCTCGACTCCAGTTCTTTAACTCA11.098901098901099No Hit
GTGTCAGCACGATCCAATCTCGCATATCAGATACGGCTTCAATGGCGGCC11.098901098901099No Hit
AGCACGATCCAATCTCGCATAGAACATAGACAGTCGCCATGACAAGTAAG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTTGAATGGTCCTTTCGAACCT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAACATCACCCAGGTCGCTGGTTGA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACCAAAGGCTCGATGGCCTGG11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATATCCTCGCGGCGAGAACATGGTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTTGTCTGAATCGCTGTCGTTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACAAAAACTTGTGTGCCTCGGCTT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTATTAAGTCCCCTTGCTCTCTT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAATATTTTTCTCACCATCTGGAAGA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATATAATTACTCGATGCAGATTGT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAAATAAACTTTTGCAGTGATCCACT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATGTCTAAGGGACAGAAACTGTAGA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATGTACTCTGCAAACAGTGCACGA11.098901098901099No Hit
AGCACGATCCAATCTCGCATAGGTACTTGTTGTGGCCGTGCCAGAGTGCA11.098901098901099No Hit
TTTGCCAGCACGATCCAATCTCGCATAATTATTATTTGAGATGGTTCCAA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGATCAAACCTTGGAGATGGAGGC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATTACTATACCTATGTCTTCATCT11.098901098901099No Hit
TGTGCCAGCATGATGAAATAGCGAAGAAAGACGAACATAGGGGGGGAAGG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAATCTCTTGATGGTGCTTGT11.098901098901099No Hit
AATCTCGCATACATCCACACTAGAGTCTTGGCCACTGATCTTCCCACACT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATATAACGATGGATTGACTGTT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGTGGTGACAAAGCAGTGAGTCA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTGATGATCTCATGAGCATGTG11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACTCCAGGACCCACCTTTCTGCCAA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATAACTTGCCTCACCATCTGGAAG11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACTTTCTTTAACAGAAAGGACAGCC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACCATATCCGGTCACTTTGAAATC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTATTACTGAATGTATGTTGGA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATCTCCAGAGTTTAGGAGCCAGGA11.098901098901099No Hit
AGCACGATCCAATCTCGCATAAATGATGGCCTGGCATGCGGATAGCAGCT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATGACATGAAATCCTGAAGTGATGG11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAGGATAAATCGGCGAGAACACGGTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTACAGATCCTTCTGCTGCACC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTCGAGAGGCTCTGCTGGTAAC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACTACGACTTGTGGATATGCATAT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACTTGCTACATGTGTCGGGCACCCA11.098901098901099No Hit
AGCACGATCCAATCTCGCATAACATTTATGGGAGCTCTCACCGACCTTTC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAACATCACTAGCTTACCTTAGGAC11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATAAGGTTATGTAGGATGGCGTGTA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTGAATGCACAGAACATTCCCG11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAAAAGATAGTGGTCTCTCCTGTCCA11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACCATGCTTTACACTCACCACACTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTATATCCCCAGAACAATGGCC11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATACTTAGTTCTCTTGGGTAGTGGGCA11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATGTGCAGCCGGCGAGAACATGGCG11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATTAGCAGCGCCTTATCCTAATGAG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTGAACGTAGAAAACACGTACA11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATAGAACGAAACAGCAAGATATGTCTC11.098901098901099No Hit
AGCACGATCCAATCTCGCATAAGATCTGGAACCACGAAAACCCTCACTCG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTAATTGGTGTGGGTGACACTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTGATATTTGAGTTGGTTCCAA11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATAACGATCAGGAGAGAAGCTCCTG11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACATCTAGCCTTGATGGTGCTTGT11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATATGTCAATGCACTTAACGCCGGAT11.098901098901099No Hit
GTGCCAGCACGATCCAATCTCGCATATTTTCTAGTTGCTGGGTGTGCTCC11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAGTTCAAAGTCGCTCTCAGCA11.098901098901099No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTGATTTTGAACATATGTATCT11.098901098901099No Hit
AGCACGATCCAATCTCGCATAGCTAGTTACTGGTGCTGCAGACGGGCCTT11.098901098901099No Hit
GTGCCAGACGCCAATCTCGCATAGTAAGTCTTGATCAAAGGCAGGAGATA11.098901098901099No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)