FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences327271
Sequences flagged as poor quality0
Sequence length100
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTGCCAGCACGCGGCTGAGCTCCCGCAGGAAGTTATCTCGTATGCCG10070.30769606839591657No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTAGGACA4680.1430007547262055No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTCCTGAA4310.13169513950212514No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTTCTAGT3950.12069508144626319No Hit
TACGTGCCAGCACGATCCTGAAATTCTGTTAACGAATCCTTCTCTTTATC3850.1176395097640793No Hit
TACGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTACAAGC3640.11122280923149316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)