FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62
Sequences flagged as poor quality0
Sequence length105
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCAGCACGATCCAATCTCGCATAGCATAAGGTTCTCCAGTTCTCTGA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGATAATTTTCCAGCACTGCAGAGA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAACTAGTTGTGGCAATAGGACATTG11.6129032258064515No Hit
GTGCCAGCACGATCCGATCTCGCATATTAAATGCTCCAAAGTTATGGTAT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAATACCTAACTCTTCCCGGGTCCAC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATAATACGCGCGAGAACATGTGCGC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACTTTATAGCTAGAGTCTTGGCCAC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGAATGTTTCTCCCAAGTAAACTTT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACGAGTACGCCTCGCAGCCGCCGCT11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTACTCCCTCACCCTGAACCTC11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTATACGGAAGGTCTGATGAGA11.6129032258064515No Hit
TGCCAGCACAATCCAATCTCGCATACATGATGGCATTTATTGTCTCACCA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATAAGATTGAGAGAAGACTGCCTAG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATACAACCTAACCTCCTNNATTCNTN11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTGGTGCCGAAGCAGGTCTCCT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACATCAATGCTTGTAGATGTCCTTC11.6129032258064515No Hit
CGATCCAATCTCGCATACATCCTGTTTGCGTTGGCAGAAGGTGGAGCAGT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAAGTCGATAAACCACGAAAACCCTC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGTACGATAGGCCACATTACCTGTG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAACACCAAACAACTCTCCCCCTCT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCCTAATTAATCTCGACCTGTCCCTCAAA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACAACATTAGGCCAGCATTACCTGT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAAGAAAAGCAGAAAACAGGGATTTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGCTGCAATACTTCTCACCCTTCTT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATCAAAAAACTCATCTTGGAAGTCT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGCAATTGATCGAAGCTGGCCTGGG11.6129032258064515No Hit
TGCCAGCACGATCCAATCTCGCATACGACAACTCGGCGGAACATGGTGCG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATACGATCTACGCAATGGAAAACACG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATTTTGAAACTTGTAGATGTCCTTC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATTAGTATAATCACTCCTCATGCCA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAATTAATTTAGGAAGGGGAGTTCTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATTTAGAGGTCATCTGGAGTATCGC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGGACAAGCCCCGATATCTTGTTTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAACAAATCTCTGAGATGGGGTGGGA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAATACTTACGGCTCGATGGCCTGGA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCAGAGGAGCAAGCGGCGAGAACAGGGGG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACAATTTCTCCTGCACGGTTTCTAA11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAACAACTATCCCGATATCTTGTTT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACAATAATGGGTCTCTGCCCAGCTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATATAGTCACGGCGAGAACATGGTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATGATTAAATTTCCGGCAGTGCATG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAATTCAACTATCTCACCGGATGACG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAATAACATATCAAAGTTATGGTATG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATATCTTGAATACTGGTTTGGAAAAC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGATTAAATAGCAGCACTAGATTCT11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTTTATTCAAGTTCTTCATCAG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATATTTCGGTCTCTGCCCAGCT11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTCCAGGCCCACAAAAAGTTTC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATGAGAAGCTTCTCGCCAGGTGAGA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGAATTTTGAAGTAGTGCTTCCTTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGCTAAACCCGGCGAGAACATGGTG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATATAACCAAAGCATCTCTGCGGGCA11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGAGTAGAAGGTCTTCTCCTCAT11.6129032258064515No Hit
CTGTTGTGCCAGCACGATCCAATCTCGCATACTACAAAACCTGGCATGCG11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTGGACCCGGCGAGAACATGGT11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGGAGCTCCCGGCGAGAACATGGTG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAACTGCTCCCGAAGCAGGTCTCCTC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATACGTACAGACGACATACTTCAGGGC11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAAATAGTAACAGGAAAATACCTGCA11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATAGCACATGTTCCATTGCACTGCTGT11.6129032258064515No Hit
TGTGCCAGCACGATCCAATCTCGCATACGACTATCGGATGTAACTTACAG11.6129032258064515No Hit
GTGCCAGCACGATCCAATCTCGCATATGAGAACCTCCGGGACAGTCTGAA11.6129032258064515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)