Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00008066568 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 431313 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGTGCCAGCACGATCCAATCTCGCATATTATCTCGTATGCCGTCTTCTGC | 1279 | 0.29653639004620774 | RNA PCR Primer, Index 35 (96% over 27bp) |
CGTGCCAGGCTGGGTATTCTAGAAACTTATCTCGTATGCCGTCTTCTGCT | 653 | 0.15139817255682067 | TruSeq Adapter, Index 10 (96% over 27bp) |
CGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTAGGACACT | 541 | 0.12543095153635528 | No Hit |
CGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTCCTGAATC | 474 | 0.10989698896161255 | No Hit |
CGTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTTCTAGTTG | 448 | 0.10386888408186166 | No Hit |