FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1047
Sequences flagged as poor quality0
Sequence length105
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCAGCACGATCCAATCTCGCATAAGTATTCCCTGGTGCTGCAGACGG30.28653295128939826No Hit
GTGCCAGCACGATCCATCTCGCATATTTTAAAGATGCTGTGAGGAGGCTA30.28653295128939826No Hit
GTGCCAGCACGATCCAATCTCGCATATTTACTACCTGGGTCCCAAGCAAC20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATATGTGTTGAGGCAGAAGTAGCAGGT20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAGGATAAAGACATCCCAACTCCTGG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAACATCTCCCGGCGAGAACATGGTG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAGCATTTCTAGGAGCTCCATCTGCT20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATATATTTAATGGCATGAAAGCAGAGG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATATTAGTACATTTGGGGCTGTTTCTC20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATACAACAAACCGGCGAGAACATGGTG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATATCACAAATCGGCGAGAACATGGTG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATACAACTACGAGACATTGAAGCTGAT20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATACATTTTCATACACTCACCACACTG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATACCACTATCAGGAGACACTGACAAG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTGCTTCTTCG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAACAGGAATACTGATCTGGCCAAGG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAGGTCATGTCTGAGATGGGGTGGGA20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTGCTTCTTGA20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATATATTAATCTGCATCACAAACACCT20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAATACGTTTTGAAAAGAGCTGTGTC20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATACAGCTATCGACATACTTCAGGGCA20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAAGTTCAAGGAGAGTATATTTAGAC20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAGAACCTCGGGTCTGGAAGGCTGAG20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAAAAACACTGTACCCACAGCAGCCC20.19102196752626552No Hit
GTGCCAGCACGATCCAATCTCGCATAACTTGTATCATGAGTACCATTTGC20.19102196752626552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)