FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length105
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCCAGCACGATCCAATCTCGCATAAAATATCTGACTGTGGGGACTGG13.125No Hit
TGCCAGCACGATCCAATCCCGCATACTTCCATACGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATATATTCTCACGGCGAGAACATGGTGC13.125No Hit
TGTGCCAGCACGATCCAATCTCGCATATCTCTACCTCTTTCTAGGTTAAG13.125No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATCGACGCAAACATGTGTGTCC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGTTAAAAGCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAATTCCTGCCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATACCAAAAATCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATATGAGCAAACGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATACCTCGTGCCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGAAACTGAAACCACGAAAACCCTCA13.125No Hit
TGCCAGCACGATCCAATCTCGCATATTAGCACCGCCTCCCTGCTCCCAGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGAAAGAGACGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATATCTTGATCCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCGCGATCCAATCTCGCATATTAGAACACGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCACGCATAAAAGGACCCGGCGAGAACATGGTGC13.125No Hit
TGTGCCAGCACGATCCAATCTCGCATATTTTTGTTCTAGCATCTCCTTCA13.125No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATTAATTTACAGCTACCCTCAT13.125No Hit
TGTGCCAGCACGATCCAATCTCGCATATGATTTAATTAAGCTTTTTCCGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGAACCTATCGGCGAGAACATGGTGC13.125No Hit
TGTGCCAGCACGATCCAATCTCGCATATAAATAAATCCAGCACTGCAGAG13.125No Hit
TGCCAGCACGATCCAATCTCGCATACCTGAAACCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGAAACTTTCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGTACCATCAACCACGAAAACCCTCA13.125No Hit
TGCCAGCACGATCCAATCTCGCATATAACATGCAGTTCGGTCCAATGACA13.125No Hit
TGCCAGCACGATCCAATCTCGCATAAATCATCCAACCACGAAAAACCTCA13.125No Hit
TGCCAGCACGATCCAATCTCGCATACCACGATCGAATGAAAATGACGGTG13.125No Hit
TGCCAGCACGATCCAATCTCGCATATTAAGACGCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATAGGTCAACCCGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATATTTAAACGTGCTGTAAACGGATCCC13.125No Hit
TGCCAGCACGATCCAATCTCGCATATCACGTCACGGCGAGAACATGGTGC13.125No Hit
TGCCAGCACGATCCAATCTCGCATACCACATTACGGCGAGAACATGGTGC13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)