FastQCFastQC Report
Sat 11 May 2024
EGAF00008073065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008073065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21420256
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC411610.1921592346982221No Hit
CTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGCCC276710.12918146263051197No Hit
GAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGCCCTGTGGATG225950.10548426685470051No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)