FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008082197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008082197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475647
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAAACTGGTCAGTGGTGAGACCAAAACGCAATACTGTACATT8440.17744251514253218No Hit
CTGCAGCGAGGAGATGTGAGCAAAACGCAATACTGTACATT7390.15536732072314133No Hit
AATTGGGCGTTGATTGGAGTCCTTTTTTAATTTTAGCATACAGACCAAAT6380.13413308609115585No Hit
TGCAGGTAGTACATTGGAGTCCTACCGGGGCAGGGATTGCAGGCTCACCC5830.12256988901433205No Hit
CTGACAGCAGTTATTGGAGTCCTGGCAGTAGTTTTAGCCCTCAGAGTTCC5000.10511997342567071No Hit
TCCATTTGAGAGATTGGAGTCCTATGGCTTCTCTGAAGACCGTGCCACCC4930.10364829379771133No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)