FastQCFastQC Report
Thu 16 May 2024
EGAF00008083262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008083262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences305841445
Total Bases30.8 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA8100680.2648653455060677Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5313250.17372563747859612No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)