FastQCFastQC Report
Mon 10 Jul 2023
EGAF00008087744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008087744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136097842
Sequences flagged as poor quality0
Sequence length4-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTGGTCCGCACCAGTTCTAAGTCGGCTGCTAGGCGCCGGCCGAGGCG1858560.13656057823459097No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1742150.12800717295723174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)