FastQCFastQC Report
Mon 10 Jul 2023
EGAF00008087745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008087745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136097842
Sequences flagged as poor quality0
Sequence length1-98
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG2905620.21349493550382673No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG2458170.1806178528532436No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2269220.16673445858164307No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC1877210.13793091590680767No Hit
GGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGAGGGC1374260.1009758846874295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)