FastQCFastQC Report
Mon 10 Jul 2023
EGAF00008089009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008089009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89676641
Sequences flagged as poor quality0
Sequence length90
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1456760.1624458703800023No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1437730.16032380160180176No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)