FastQCFastQC Report
Thu 29 Jun 2023
EGAF00008089240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008089240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38612805
Sequences flagged as poor quality0
Sequence length25-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT579280.15002277094347327No Hit
CTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC490050.12691385668562538No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)