FastQCFastQC Report
Fri 10 May 2024
EGAF00008090674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008090674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences357635227
Total Bases54 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA32590090.9112662159536091No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4177240.11680169302785152No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)