FastQCFastQC Report
Mon 10 Jul 2023
EGAF00008090710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008090710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences284036086
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20014860.7046590551877975No Hit
TCCATGCCGTCTACAGGGATGACCTGAAGAAATTGCTAGAGACCGAGTGT3000290.10563059230438768No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2840510.10000525074127377No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)