FastQCFastQC Report
Sun 9 Jul 2023
EGAF00008090874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008090874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences260428845
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAACTAGAACACAAT9279580.3563192088034641No Hit
TTACGTCACGGTAAGG3838380.14738689948112313No Hit
TGTGTTACTGCAACAG3443940.13224111177085626No Hit
GGCGGTTACGTAGTTG2729340.10480175496688933No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)