FastQCFastQC Report
Sun 9 Jul 2023
EGAF00008090885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008090885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences738699009
Sequences flagged as poor quality0
Sequence length10
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGACTACCA73016351398.84452315543854No Hit
ACGACTACAA17348940.2348580380997912No Hit
ACGACTAACA17190490.23271305079008167No Hit
TCGACTACCA12200460.16516145075808542No Hit
ACCACTACCA7469380.10111533803343711No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)