FastQCFastQC Report
Sun 9 Jul 2023
EGAF00008090898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008090898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences242231274
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCATTTGCGGTAAG9906100.4089521487634169No Hit
GTGCGAGTGGATTGCC3713330.15329688601646044No Hit
AGGTTAACTACGGGTA3231550.13340762927251087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)