FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008091185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008091185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21114
Sequences flagged as poor quality0
Sequence length301
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA13686.479113384484228No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4932.3349436392914655No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3581.6955574500331534No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3491.6529317040825993No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3381.600833570143033No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3331.577152600170503No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2981.4113858103627923No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2801.3261343184616843No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2791.3213981244671782No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2691.274036184522118No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2651.2550914085440938No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2601.2314104385715638No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2541.2029932746045278No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2541.2029932746045278No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2501.1840484986265036No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2491.1793123046319975No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2481.174576110637492No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2421.1461589466704556No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2401.1366865586814436No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2281.0798522307473715No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2191.0372264847968171No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2171.0277540968078052No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2151.0182817088187932No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2141.0135455148242873No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2080.9851283508572511No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2080.9851283508572511No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2030.961447380884721No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2030.961447380884721No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1950.923557828928673No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1920.9093492469451548No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1660.7862082030879985No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1640.7767358150989865No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1600.7577910391209624No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA1590.7530548451264564No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1560.7388462631429383No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1550.7341100691484324No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1530.7246376811594203No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1520.7199014871649143No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA1460.6914843231978782No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1410.6678033532253481No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1390.6583309652363362No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1320.625177607274794No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1300.6157052192857819No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1160.5493985033626978No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA880.4167850715165293No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA830.3931041015439993No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA810.3836317135549872No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA680.322061191626409No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGCAGGCCTGA630.29838022165387895No Hit
GCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA560.26522686369233683No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA550.2604906696978308No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCGAGTCTGA530.2510182817088188No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGATGGCCTGA510.24154589371980675No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA450.2131287297527707No Hit
GCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA440.20839253575826466No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA430.20365634176375863No Hit
GCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA420.19892014776925265No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA420.19892014776925265No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGTCGGCAGACTGA410.19418395377474662No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA380.17997537179122858No Hit
TCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA370.17523917779672257No Hit
ACCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA370.17523917779672257No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA350.16576678980771054No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA350.16576678980771054No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGA350.16576678980771054No Hit
TCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA340.1610305958132045No Hit
CCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA340.1610305958132045No Hit
ACCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA320.1515582078241925No Hit
ACCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA320.1515582078241925No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCGAGTCTGA320.1515582078241925No Hit
TCCTATGGGGCGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA320.1515582078241925No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA310.1468220138296865No Hit
GCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA300.14208581983518045No Hit
TCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA300.14208581983518045No Hit
TCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA300.14208581983518045No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGGGAAACCCTGA300.14208581983518045No Hit
ACCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA290.13734962584067445No Hit
GCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA290.13734962584067445No Hit
ACCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA290.13734962584067445No Hit
TCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA290.13734962584067445No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGCCGAGAGGCTGA280.13261343184616842No Hit
TCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA270.1278772378516624No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGGAAGCCTGA270.1278772378516624No Hit
ACCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA270.1278772378516624No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGA270.1278772378516624No Hit
ACCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA270.1278772378516624No Hit
GCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA260.1231410438571564No Hit
ACCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA260.1231410438571564No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA260.1231410438571564No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGTAAGCCTGA260.1231410438571564No Hit
ACCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA260.1231410438571564No Hit
CCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA260.1231410438571564No Hit
GCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA250.11840484986265039No Hit
CCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA250.11840484986265039No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA250.11840484986265039No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA250.11840484986265039No Hit
GCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA250.11840484986265039No Hit
TCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA240.11366865586814436No Hit
TCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA240.11366865586814436No Hit
GCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA240.11366865586814436No Hit
TCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA240.11366865586814436No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA230.10893246187363835No Hit
TCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCCTGA230.10893246187363835No Hit
TCCTATGGGGCGCAGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA230.10893246187363835No Hit
GCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA220.10419626787913233No Hit
GCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGGAACCCTGA220.10419626787913233No Hit
CCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA220.10419626787913233No Hit
CCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA220.10419626787913233No Hit
ACCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGGCGTTAGCCTGA220.10419626787913233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)