FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008091439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008091439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37493
Sequences flagged as poor quality0
Sequence length301
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA18825.0196036593497455No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6491.730989784759822No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5171.3789240658256208No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4781.2749046488677886No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4651.2402315098818446No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4611.2295628517323234No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4591.2242285226575627No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4581.2215613581201825No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4171.1122076120875897No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA3961.0561971568026032No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3951.0535299922652228No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3801.0135225242045183No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3660.9761822206811939No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA3620.9655135625316726No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3490.9308404235457285No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3230.8614941455738404No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3190.8508254874243192No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3190.8508254874243192No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3170.8454911583495586No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3110.8294881711252767No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2920.7788120449150508No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2900.7734777158402902No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2890.7708105513029099No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2880.7681433867655295No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2810.7494732350038674No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2700.7201344250926839No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2690.7174672605553036No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2640.704131437868402No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2580.6881284506441202No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2470.6587896407329369No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA2370.6321179953591337No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2310.6161150081348518No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2250.6001120209105699No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2170.5787747046115275No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2130.5681060464620062No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2080.5547702237751047No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1930.5147627557144No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1890.5040940975648788No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1870.49875976849011816No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1720.4587523004294135No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA1680.4480836422798923No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1640.437414984130371No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1640.437414984130371No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1510.40274184514442696No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1450.3867388579201451No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA1350.36006721254634194No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1350.36006721254634194No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1310.34939855439682077No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1290.3440642253220601No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA1260.3360627317099192No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1140.30405675726135545No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA1120.29872242818659483No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA1090.2907209345744539No Hit
GCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA1060.28271944096231294No Hit
GCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA1060.28271944096231294No Hit
TCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA1010.2693836182754114No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA1000.2667164537380311No Hit
GCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA990.2640492892006508No Hit
ACCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA970.2587149601258902No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA970.2587149601258902No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGA940.2507134665137492No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGA860.22937615021470675No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA860.22937615021470675No Hit
GCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA850.22670898567732642No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA830.2213746566025658No Hit
ACCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA830.2213746566025658No Hit
TCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA830.2213746566025658No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA810.21604032752780522No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA810.21604032752780522No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA770.20537166937828394No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA760.20270450484090363No Hit
ACCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA750.20003734030352333No Hit
ACCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA750.20003734030352333No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA740.19737017576614302No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA740.19737017576614302No Hit
CCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA720.19203584669138238No Hit
ACCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA720.19203584669138238No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA710.18936868215400207No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGA700.18670151761662176No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA690.18403435307924146No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA690.18403435307924146No Hit
GCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA680.18136718854186115No Hit
GCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA680.18136718854186115No Hit
TCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA680.18136718854186115No Hit
ACCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA680.18136718854186115No Hit
GCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA670.17870002400448085No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA670.17870002400448085No Hit
TCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA660.1760328594671005No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA660.1760328594671005No Hit
CCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA660.1760328594671005No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA660.1760328594671005No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA650.1733656949297202No Hit
TCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA640.1706985303923399No Hit
CCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA630.1680313658549596No Hit
TCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA630.1680313658549596No Hit
GCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA620.16536420131757928No Hit
CCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA620.16536420131757928No Hit
ACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA610.16269703678019898No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA610.16269703678019898No Hit
GCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA610.16269703678019898No Hit
ACCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA590.15736270770543834No Hit
TCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA590.15736270770543834No Hit
ACCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA590.15736270770543834No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA580.15469554316805803No Hit
GCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA570.15202837863067772No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA570.15202837863067772No Hit
TCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA550.1466940495559171No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA550.1466940495559171No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA550.1466940495559171No Hit
TCCTATGGGGCGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA540.1440268850185368No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA540.1440268850185368No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA540.1440268850185368No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA530.14135972048115647No Hit
ACCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA520.13869255594377616No Hit
GCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA520.13869255594377616No Hit
ACCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA510.13602539140639586No Hit
CCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA500.13335822686901555No Hit
GCCTATGGGGCGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA500.13335822686901555No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA500.13335822686901555No Hit
TCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA500.13335822686901555No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA490.13069106233163524No Hit
TCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA480.12802389779425494No Hit
ACCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA480.12802389779425494No Hit
CCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA480.12802389779425494No Hit
ACCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA470.1253567332568746No Hit
CCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA470.1253567332568746No Hit
TCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA470.1253567332568746No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGA470.1253567332568746No Hit
GCCTACGGGAGGCTGTAGTGGGGAATATTGCACAATGGGGGAAACCCTGA470.1253567332568746No Hit
TCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA460.12268956871949431No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA460.12268956871949431No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGCGCAATGGGGGAAACCCTGA450.120022404182114No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA440.11735523964473368No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA440.11735523964473368No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA440.11735523964473368No Hit
GCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA430.11468807510735338No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA430.11468807510735338No Hit
GCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA430.11468807510735338No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA430.11468807510735338No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA420.11202091056997307No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA420.11202091056997307No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA410.10935374603259275No Hit
TCCTATGGGGCGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA410.10935374603259275No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA410.10935374603259275No Hit
GCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA400.10668658149521244No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA400.10668658149521244No Hit
CCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA400.10668658149521244No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA390.10401941695783214No Hit
CCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA390.10401941695783214No Hit
CCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA390.10401941695783214No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA390.10401941695783214No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA390.10401941695783214No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA380.10135225242045182No Hit
ACCTATGGGGCGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA380.10135225242045182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)