FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008091530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008091530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29095
Sequences flagged as poor quality0
Sequence length301
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4111.4126138511771782No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3861.3266884344389072No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3861.3266884344389072No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3751.2888812510740677No Hit
TGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3691.2682591510568826No Hit
AGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3661.25794810104829No Hit
TGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3651.2545110843787592No Hit
TGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3141.079223234232686No Hit
CGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2961.0173569341811306No Hit
TGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2880.989860800824884No Hit
AGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2850.9795497508162915No Hit
AGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2570.8833132840694277No Hit
AGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2570.8833132840694277No Hit
CGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2560.879876267399897No Hit
CGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2530.8695652173913043No Hit
CGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2380.8180099673483416No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2280.7836398006530332No Hit
TGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2100.7217735006014779No Hit
TGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2100.7217735006014779No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1990.6839663172366386No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1950.6702182505585152No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1900.6530331672108609No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1710.5877298504897749No Hit
TGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1690.5808558171507131No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1680.5774188004811823No Hit
TGACTACTAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1640.5636707338030589No Hit
GGACTACGGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1640.5636707338030589No Hit
TGACTACTCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1630.5602337171335281No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1590.5464856504554046No Hit
GGACTACCGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1550.5327375837772813No Hit
TGACTACAAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1520.5224265337686888No Hit
GGACTACTAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1510.518989517099158No Hit
TGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1500.5155525004296271No Hit
AGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1490.5121154837600963No Hit
GGACTACGCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1470.5052414504210345No Hit
TGACTACCAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1450.49836741708197285No Hit
TGACTACTGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1450.49836741708197285No Hit
CGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1450.49836741708197285No Hit
GGACTACTCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1420.4880563670733803No Hit
TGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1410.48461935040384946No Hit
AGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1390.4777453170647878No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1390.4777453170647878No Hit
TGACTACGAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1380.47430830039525695No Hit
GGACTACAAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1380.47430830039525695No Hit
AGACTACTAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1370.47087128372572606No Hit
GGACTACTGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1360.46743426705619523No Hit
TGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1350.4639972503866644No Hit
CGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1320.4536862003780718No Hit
AGAATACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1310.45024918370854095No Hit
TGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1310.45024918370854095No Hit
GGACTACACGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1310.45024918370854095No Hit
GGACTACGAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1310.45024918370854095No Hit
TGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1310.45024918370854095No Hit
TGAATACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1300.4468121670390101No Hit
GGACTACCCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1300.4468121670390101No Hit
GGAATACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1270.43650111703041766No Hit
TGACTACCGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1270.43650111703041766No Hit
GGACTACAGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1260.4330641003608867No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1250.4296270836913559No Hit
AGACTACTCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1250.4296270836913559No Hit
TGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1220.4193160336827634No Hit
TGACTACGCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1210.4158790170132325No Hit
AGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1210.4158790170132325No Hit
AGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1190.4090049836741708No Hit
AGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1190.4090049836741708No Hit
AGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1180.40556796700464No Hit
AGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1170.40213095033510915No Hit
AGACTACAAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1150.3952569169960474No Hit
CGACTACTCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1140.3918199003265166No Hit
TGACTACCCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1130.38838288365698576No Hit
TGACTACGGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1120.3849458669874549No Hit
TGACTACAGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1110.38150885031792403No Hit
AGACTACGAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1100.3780718336483932No Hit
GGACTACCAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1100.3780718336483932No Hit
AGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1090.3746348169788623No Hit
AGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1080.37119780030933147No Hit
CGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1040.35744973363120813No Hit
AGACTACTGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1030.35401271696167724No Hit
CGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1030.35401271696167724No Hit
CGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1020.3505757002921464No Hit
TGACTACACGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1010.3471386836226156No Hit
AGACTACCAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1010.3471386836226156No Hit
CGAATACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA990.3402646502835539No Hit
CGACTACACGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA990.3402646502835539No Hit
CGACTACTAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA980.336827633614023No Hit
AGACTACACGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA980.336827633614023No Hit
CGACTACGCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA970.3333906169444922No Hit
CGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA950.32651658360543045No Hit
CGACTACAAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA940.3230795669358996No Hit
CGACTACGAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA940.3230795669358996No Hit
AGACTACAGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA920.31620553359683795No Hit
CGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA910.3127685169273071No Hit
CGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA900.3093315002577762No Hit
CGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA890.3058944835882454No Hit
CGACTACTGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA860.2955834335796529No Hit
CGACTACAGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA850.292146416910122No Hit
AGACTACGGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA850.292146416910122No Hit
AGACTACCGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA810.2783983502319986No Hit
CGACTACCGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA810.2783983502319986No Hit
AGACTACGCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA800.27496133356246777No Hit
CGACTACGGGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA790.27152431689293693No Hit
CGACTACCAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA740.25433923354528265No Hit
CGACTACCCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA690.23715415019762848No Hit
AGACTACCCGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA690.23715415019762848No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA610.2096580168413817No Hit
TGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA540.18559890015466574No Hit
AGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA510.1752878501460732No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA490.1684138168070115No Hit
TGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA470.1615397834679498No Hit
TGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA460.15810276679841898No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA450.1546657501288881No Hit
TGACTACCAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA450.1546657501288881No Hit
TGACTACGAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA440.15122873345935728No Hit
TGACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA440.15122873345935728No Hit
TGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA440.15122873345935728No Hit
TGACTACAAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA430.14779171678982644No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA420.14435470012029558No Hit
AGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA410.14091768345076472No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA410.14091768345076472No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA400.13748066678123388No Hit
AGACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA400.13748066678123388No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA380.1306066334421722No Hit
CGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA370.12716961677264133No Hit
CGACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA350.12029558343357966No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA340.11685856676404881No Hit
CGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA330.11342155009451795No Hit
AGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA330.11342155009451795No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA330.11342155009451795No Hit
GGACTACTAGGGTCTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA330.11342155009451795No Hit
AGACTACGAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA320.10998453342498712No Hit
CGACTACAAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA320.10998453342498712No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA320.10998453342498712No Hit
TGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA320.10998453342498712No Hit
AGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA310.10654751675545626No Hit
CGACTACCAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA310.10654751675545626No Hit
CGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA300.10311050008592541No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA300.10311050008592541No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA300.10311050008592541No Hit
TGACTACTGGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCCTCA300.10311050008592541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)