FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008091867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008091867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29115
Sequences flagged as poor quality0
Sequence length321
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA10603.640735016314615No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA9223.166752533058561No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3421.1746522411128284No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA3371.1574789627339859No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3041.0441353254336252No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2700.9273570324574961No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2550.8758371973209685No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2530.8689678859694315No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2500.858663918942126No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2490.8552292632663575No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2460.8449252962390521No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2460.8449252962390521No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2440.838055984887515No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2420.831186673535978No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2370.8140133951571356No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2240.7693628713721449No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2180.748754937317534No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2170.7453202816417653No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2170.7453202816417653No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2150.7384509702902284No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA2140.7350163146144599No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2050.7041044135325434No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2010.6903657908294694No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1970.6766271681263953No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1950.6697578567748583No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1940.6663232010990898No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1890.6491499227202473No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1880.6457152670444788No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1870.6422806113687103No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1860.6388459556929418No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1850.6354113000171733No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1810.6216726773140993No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1770.6079340546110252No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA1750.6010647432594882No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1740.5976300875837197No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1730.5941954319079512No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1720.5907607762321827No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1710.5873261205564142No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1700.5838914648806457No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1680.5770221535291087No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1630.5598488751502662No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1590.5461102524471921No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1590.5461102524471921No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1580.5426755967714237No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1570.5392409410956551No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA1570.5392409410956551No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1550.5323716297441181No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1550.5323716297441181No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1540.5289369740683497No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1510.5186330070410442No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1490.5117636956895071No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1460.5014597286622016No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1450.49802507298643306No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1420.48772110595912754No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1410.48428645028335915No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1380.4739824832560535No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1350.46367851622874806No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1350.46367851622874806No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1330.45680920487721105No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1290.44307058217413703No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1270.4362012708226001No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1260.4327666151468315No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1250.429331959471063No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1240.42589730379529456No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1190.408724025416452No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1180.40528936974068347No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1170.401854714064915No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1130.388116091361841No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1130.388116091361841No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1110.381246780010304No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1080.37094281298299847No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1080.37094281298299847No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1060.36407350163146146No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1050.36063884595569295No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1050.36063884595569295No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1030.35376953460415594No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1010.34690022325261893No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1010.34690022325261893No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1000.34346556757685043No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1000.34346556757685043No Hit
GCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA970.3331616005495449No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA960.3297269448737764No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA910.3125536664949339No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA910.3125536664949339No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA900.3091190108191654No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA890.30568435514339687No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA890.30568435514339687No Hit
TCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA770.26446848703417486No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA770.26446848703417486No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA750.2575991756826378No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA690.23699124162802676No Hit
ACCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA680.23355658595225828No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGCGCAATGGGGGAAACCCTGA660.22668727460072127No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA640.21981796324918426No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA620.21294865189764728No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA600.20607934054611027No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA590.20264468487034173No Hit
TCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA590.20264468487034173No Hit
ACCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA590.20264468487034173No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA580.19921002919457326No Hit
TCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA560.19234071784303622No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA540.18547140649149924No Hit
TCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA540.18547140649149924No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA530.18203675081573073No Hit
GCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA530.18203675081573073No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA520.17860209513996222No Hit
TCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA510.17516743946419372No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA480.1648634724368882No Hit
TCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA480.1648634724368882No Hit
TCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA470.1614288167611197No Hit
ACCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA470.1614288167611197No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA460.1579941610853512No Hit
TCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA450.1545595054095827No Hit
GCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA440.15112484973381418No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA430.14769019405804568No Hit
ACCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA430.14769019405804568No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA430.14769019405804568No Hit
TCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA430.14769019405804568No Hit
GCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA430.14769019405804568No Hit
TCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA420.14425553838227717No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA420.14425553838227717No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA420.14425553838227717No Hit
ACCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA420.14425553838227717No Hit
GCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA420.14425553838227717No Hit
ACCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA400.13738622703074016No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA400.13738622703074016No Hit
GCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA390.13395157135497165No Hit
TCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA390.13395157135497165No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA380.13051691567920315No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA370.12708226000343467No Hit
GCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA370.12708226000343467No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA370.12708226000343467No Hit
TCCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA370.12708226000343467No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA370.12708226000343467No Hit
GCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA360.12364760432766615No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA360.12364760432766615No Hit
TCCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA350.12021294865189765No Hit
TCCTACGGGTGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA340.11677829297612914No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA340.11677829297612914No Hit
TCCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA340.11677829297612914No Hit
ACCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA340.11677829297612914No Hit
GCCTACGGGGGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA340.11677829297612914No Hit
ACCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA330.11334363730036064No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA330.11334363730036064No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA320.10990898162459213No Hit
TCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA320.10990898162459213No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA320.10990898162459213No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA320.10990898162459213No Hit
ACCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA310.10647432594882364No Hit
TCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA310.10647432594882364No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA310.10647432594882364No Hit
GCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA310.10647432594882364No Hit
GCCTACGGGAGGCTGCAGTCGGGAATATTGCGCAATGGAGGAAACTCTGA310.10647432594882364No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA310.10647432594882364No Hit
GCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA300.10303967027305513No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA300.10303967027305513No Hit
ACCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA300.10303967027305513No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA300.10303967027305513No Hit
TCCTACGGGGGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA300.10303967027305513No Hit
ACCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA300.10303967027305513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)