FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092013

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092013
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48060
Sequences flagged as poor quality0
Sequence length301
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA515810.732417811069496No Hit
TCCTATGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA20384.24053266749896No Hit
GCCTATGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA14252.965043695380774No Hit
ACCTATGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA14252.965043695380774No Hit
TCCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA13352.7777777777777777No Hit
TCCTACGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA13082.721598002496879No Hit
TCCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA13012.7070328755722013No Hit
ACCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA11312.3533083645443194No Hit
TCCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA10622.209737827715356No Hit
GCCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA10522.1889305035372453No Hit
ACCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA10012.0828131502288803No Hit
CCCTATGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA9712.0203911776945485No Hit
GCCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA9551.9870994590095714No Hit
GCCTACGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA9351.9454848106533502No Hit
TCCTACGGGGTGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA9041.880982105701207No Hit
TCCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8911.853932584269663No Hit
ACCTACGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8611.7915106117353308No Hit
CCCTACGGGTGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8481.7644610903037867No Hit
ACCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8461.7602996254681647No Hit
CCCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8311.729088639200999No Hit
TCCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8281.7228464419475655No Hit
TCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8231.7124427798585102No Hit
TCCTATGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8191.7041198501872659No Hit
GCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA8161.6978776529338329No Hit
GCCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA7971.6583437369954224No Hit
GCCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA7941.6521015397419891No Hit
CCCTACGGGGGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA7651.5917602996254683No Hit
ACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA7281.5147732001664587No Hit
ACCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA7271.5126924677486475No Hit
CCCTACGGGGCGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA6881.4315439034540158No Hit
ACCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA6481.348314606741573No Hit
CCCTACGGGGGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA6181.285892634207241No Hit
GCCTACGGGGTGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA6101.2692467748647522No Hit
GCCTATGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5921.2317935913441531No Hit
CCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5841.2151477320016646No Hit
CCCTACGGGTGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5811.2089055347482314No Hit
ACCTATGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5731.1922596754057428No Hit
TCCTACGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5471.1381606325426552No Hit
CCCTACGGGGTGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5261.0944652517686226No Hit
ACCTACGGGGTGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA5151.071577195172701No Hit
CCCTATGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA4590.9550561797752809No Hit
GCCTACGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA4060.8447773616312942No Hit
ACCTACGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA3410.7095297544735747No Hit
CCCTACGGGGCGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGA3200.6658343736995422No Hit
GCCTACGGGAGGCTGCAGCTGAGAATCTTCCACAATGGACGAAAGTCTGA1300.27049521431543905No Hit
TCCTATGGGGCGCTGCAGCTGAGAATCTTCCACAATGGACGAAAGTCTGA560.1165210153974199No Hit
CCTACGGGAGGCTGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGAT540.11235955056179776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)