FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42610
Sequences flagged as poor quality0
Sequence length321
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA23845.594930767425487No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA7801.8305562074630368No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6041.417507627317531No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5801.361182820934053No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5741.3471016193381835No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5361.2579206758976766No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5031.1804740671203942No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4951.1616991316592349No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4861.1405773292654307No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4691.100680591410467No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4240.9950715794414456No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4110.9645623093170618No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA4070.955174841586482No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3920.9199718375968082No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3890.9129312367988736No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3860.9058906360009387No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3830.898850035203004No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3810.8941563013377141No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3770.8847688336071345No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3720.8730344989439099No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3600.8448720957521709No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3560.8354846280215912No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA3530.8284440272236564No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3440.8073222248298522No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3350.7862004224360478No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3200.7509974184463741No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3190.7486505515137292No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3170.7439568176484394No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2990.7017132128608308No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2970.697019478995541No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2850.6688570758038019No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2660.6242666040835484No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2640.6195728702182587No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA2640.6195728702182587No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2590.6078385355550341No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2570.6031448016897442No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2530.5937573339591645No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2310.5421262614409763No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2300.5397793945083313No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2170.5092701243839475No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2150.5045763905186575No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2110.49518892278807797No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1990.46702651959633884No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA1960.4599859187984041No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1810.42478291480873037No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1580.3708049753578972No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1420.3332551044355785No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1350.31682703590706407No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGCGCAATGGGGGAAACCCTGA1300.30509270124383947No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1280.30039896737854965No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGAAAGCCTGA1210.28397089885003524No Hit
TCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1140.26754283032152076No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1130.26519596338887585No Hit
TCCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA1130.26519596338887585No Hit
TCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA1100.2581553625909411No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1040.2440741609950716No Hit
ACCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA990.232339826331847No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA980.22999295939920206No Hit
TCCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA960.22529922553391224No Hit
TCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA910.2135648908706876No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA890.2088711570053978No Hit
TCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA880.20652429007275286No Hit
TCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA850.19948368927481813No Hit
ACCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA830.1947899554095283No Hit
TCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA820.19244308847688338No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA820.19244308847688338No Hit
GCCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA810.19009622154423844No Hit
TCCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA800.18774935461159353No Hit
TCCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA780.1830556207463037No Hit
GCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA770.18070875381365875No Hit
GCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA760.17836188688101384No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA750.17601501994836893No Hit
GCCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA750.17601501994836893No Hit
ACCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA750.17601501994836893No Hit
TCCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA740.173668153015724No Hit
ACCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA740.173668153015724No Hit
ACCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA730.1713212860830791No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCCACAATGGACGCAAGTCTGA730.1713212860830791No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCCACAATGGACGAAAGTCTGA720.16897441915043415No Hit
GCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA720.16897441915043415No Hit
CCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA720.16897441915043415No Hit
GCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA710.16662755221778924No Hit
CCCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA710.16662755221778924No Hit
ACCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA700.16428068528514433No Hit
TCCTACGGGTGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA690.16193381835249943No Hit
ACCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA690.16193381835249943No Hit
GCCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA680.15958695141985452No Hit
TCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA680.15958695141985452No Hit
ACCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA680.15958695141985452No Hit
ACCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA670.15724008448720958No Hit
TCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA670.15724008448720958No Hit
ACCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA660.15489321755456467No Hit
GCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA660.15489321755456467No Hit
ACCTACGGGTGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA650.15254635062191974No Hit
ACCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA650.15254635062191974No Hit
ACCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA640.15019948368927483No Hit
CCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA640.15019948368927483No Hit
ACCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA620.14550574982398498No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA610.14315888289134004No Hit
GCCTACGGGTGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA610.14315888289134004No Hit
GCCTACGGGGGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA610.14315888289134004No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA600.14081201595869514No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA600.14081201595869514No Hit
ACCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA590.13846514902605023No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA580.1361182820934053No Hit
TCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA570.13377141516076038No Hit
CCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA570.13377141516076038No Hit
ACCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA570.13377141516076038No Hit
GCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA560.13142454822811545No Hit
TCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA550.12907768129547054No Hit
TCCTACGGGGTGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA550.12907768129547054No Hit
TCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.12673081436282563No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA540.12673081436282563No Hit
GCCTACGGGACGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA540.12673081436282563No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA530.1243839474301807No Hit
GCCTACGGGGGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA530.1243839474301807No Hit
CCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA530.1243839474301807No Hit
ACCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA520.1220370804975358No Hit
TCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA520.1220370804975358No Hit
GCCTACGGGAGGCAGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA520.1220370804975358No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGA510.11969021356489087No Hit
CCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA510.11969021356489087No Hit
TCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA510.11969021356489087No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA500.11734334663224597No Hit
TCCTACGGGGGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA500.11734334663224597No Hit
CCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA490.11499647969960103No Hit
CCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA490.11499647969960103No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA490.11499647969960103No Hit
GCCTACGGGGTGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA490.11499647969960103No Hit
TCCTACGGGGGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA490.11499647969960103No Hit
ACCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA490.11499647969960103No Hit
TCCTACGGGTGGCAGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA480.11264961276695612No Hit
ACCTACGGGGGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA480.11264961276695612No Hit
TCCTATGGGGCGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA480.11264961276695612No Hit
GCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA480.11264961276695612No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA470.11030274583431118No Hit
CCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.11030274583431118No Hit
CCCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA460.10795587890166627No Hit
GCCTACGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA460.10795587890166627No Hit
TCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA460.10795587890166627No Hit
TCCTACGGGGTGCAGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA460.10795587890166627No Hit
GCCTACGGGTGGCAGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA460.10795587890166627No Hit
ACCTACGGGGTGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA450.10560901196902137No Hit
CCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA450.10560901196902137No Hit
CCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA450.10560901196902137No Hit
ACCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA440.10326214503637643No Hit
ACCTACGGGGGGCTGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA440.10326214503637643No Hit
CCCTACGGGAGGCAGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA440.10326214503637643No Hit
GCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA440.10326214503637643No Hit
GCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA440.10326214503637643No Hit
ACCTACGGGAGGCAGCAGTGGGGGATATTGCGCAATGGGGGGAACCCTGA430.10091527810373152No Hit
ACCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA430.10091527810373152No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGCGAAAGCCTGA430.10091527810373152No Hit
TCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA430.10091527810373152No Hit
TCCTACGGGGCGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA430.10091527810373152No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)