FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25070
Sequences flagged as poor quality0
Sequence length321
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA14055.604307937774232No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA4941.9704826485839648No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4601.834862385321101No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3651.4559234144395692No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3641.451934583167132No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3531.408057439170323No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3211.2804148384523335No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3041.2126047068209014No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3011.20063821300359No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2961.1806940566414041No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2821.1248504188272836No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2581.0291184682887913No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2440.973274830474671No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2360.9413641802951735No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2280.9094535301156762No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2270.9054646988432389No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2250.8974870362983646No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2190.8735540486637416No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2180.8695652173913043No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2120.8456322297566814No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2080.8296769046669326No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2080.8296769046669326No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2070.8256880733944955No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2030.8097327483047466No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2010.8017550857598723No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1990.793777423214998No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1890.7538891104906262No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1780.7100119664938174No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1770.7060231352213802No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1690.6741124850418828No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1660.6621459912245712No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1610.6422018348623854No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1580.6302353410450737No Hit
TCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1540.6142800159553251No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1510.6023135221380136No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1500.5983246908655764No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1490.5943358595931392No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1450.5783805345033906No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1380.5504587155963303No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1340.5345033905065816No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1340.5345033905065816No Hit
TCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1320.5265257279617073No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1310.5225368966892701No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1290.5145592341443956No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1190.47467092142002393No Hit
ACCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1150.45871559633027525No Hit
TCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1110.4427602712405265No Hit
TCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1100.4387714399680893No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1100.4387714399680893No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA1090.43478260869565216No Hit
ACCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1020.4068607897885919No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1020.4068607897885919No Hit
TCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1010.40287195851615476No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA990.39489429597128045No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA970.3869166334264061No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA950.3789389708815317No Hit
ACCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA900.35899481451934584No Hit
ACCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA880.3510171519744715No Hit
GCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA870.34702832070203427No Hit
GCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA840.33506182688472275No Hit
TCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA840.33506182688472275No Hit
TCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA820.32708416433984844No Hit
CCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA820.32708416433984844No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA790.31511767052253686No Hit
ACCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA770.30714000797766255No Hit
CCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA760.30315117670522534No Hit
ACCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA760.30315117670522534No Hit
GCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA760.30315117670522534No Hit
GCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA740.29517351416035104No Hit
TCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA730.2911846828879139No Hit
CCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA730.2911846828879139No Hit
GCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA710.28320702034303946No Hit
CCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA700.2792181890706023No Hit
CCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA700.2792181890706023No Hit
ACCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA690.27522935779816515No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA690.27522935779816515No Hit
TCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA670.2672516952532908No Hit
GCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA630.25129637016354206No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGCGCAATGGGGGCAACCCTGA590.2353410450737934No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGA550.21938571998404466No Hit
TCCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.2153968887116075No Hit
CCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.2153968887116075No Hit
ACCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA530.21140805743917035No Hit
CCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA510.20343039489429596No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA500.1994415636218588No Hit
CCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA490.19545273234942165No Hit
GCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA480.19146390107698447No Hit
GCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.18747506980454726No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA470.18747506980454726No Hit
CCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA460.1834862385321101No Hit
ACCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA460.1834862385321101No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGAAACCCTGA460.1834862385321101No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA460.1834862385321101No Hit
ACCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA430.17151974471479856No Hit
CCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA430.17151974471479856No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA410.16354208216992422No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA390.15556441962504985No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA370.14758675708017552No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGA370.14758675708017552No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGGGAAACCCTGA370.14758675708017552No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA340.13562026326286397No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA340.13562026326286397No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA340.13562026326286397No Hit
ACCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA340.13562026326286397No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA320.1276426007179896No Hit
TCCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA320.1276426007179896No Hit
TCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA320.1276426007179896No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA320.1276426007179896No Hit
CCCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA310.12365376944555245No Hit
TCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA310.12365376944555245No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA310.12365376944555245No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA300.11966493817311527No Hit
TCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA300.11966493817311527No Hit
ACCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA300.11966493817311527No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGGAACCCTGA290.1156761069006781No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA290.1156761069006781No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA280.11168727562824092No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA280.11168727562824092No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA280.11168727562824092No Hit
GCCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA280.11168727562824092No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA280.11168727562824092No Hit
TCCTATGGGGCGCTGCAGTGGGGAATTTTGCGCAATGGGGGCAACCCTGA270.10769844435580375No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA270.10769844435580375No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA260.10370961308336657No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA260.10370961308336657No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)