FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46991
Sequences flagged as poor quality0
Sequence length321
%GC54

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA30866.567214998616756No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA11532.453661339405418No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA8281.7620395394862847No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA8041.7109659296461026No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA8011.7045817284160796No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA7391.5726415696622758No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6921.4726224170585858No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6671.4194207401417291No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6631.4109084718350322No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6421.3662190632248727No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5811.2364069715477433No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5541.1789491604775382No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5411.151284288480773No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5371.1427720201740759No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5271.1214913494073333No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5241.1151071481773105No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5211.1087229469472877No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5151.0959545444872423No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5141.093826477410568No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA5061.076801940797174No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4861.034240599263689No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4751.010831861420272No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4550.9682705198867868No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4520.961886318656764No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4350.9257091783533017No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4320.919324977123279No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4230.9001723734332107No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3900.8299461599029602No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3870.8235619586729372No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3860.8214338915962632No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3830.8150496903662404No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3630.7724883488327552No Hit
GCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA3500.7448234768359899No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3470.7384392756059671No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3310.704390202379179No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA3210.6831095316124364No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3200.6809814645357621No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3170.6745972633057394No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA3150.6703411291523909No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3090.6575727266923453No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2950.6277797876189057No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2910.6192675193122087No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2800.5958587814687919No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2700.5745781107020493No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2590.5511693728586324No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA2550.5426571045519355No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2440.5192483667085187No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2070.44050988487157117No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1990.4234853482581771No Hit
TCCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA1490.3170819944244643No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA1250.2660083845842821No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA1140.24259964674086526No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCCACAATGGACGAAAGTCTGA1130.240471579664191No Hit
TCCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA1050.22344704305079696No Hit
GCCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA1020.21706284182077418No Hit
TCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1010.21493477474409994No Hit
TCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA970.2064225064374029No Hit
ACCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA950.20216637228405437No Hit
ACCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA940.20003830520738014No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGA910.19365410397735738No Hit
TCCTACGGGGTGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA890.18939796982400883No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA890.18939796982400883No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA890.18939796982400883No Hit
TCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA880.1872699027473346No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA880.1872699027473346No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA860.18301376859398608No Hit
CCCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA860.18301376859398608No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA850.18088570151731181No Hit
TCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA850.18088570151731181No Hit
GCCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA820.17450150028728906No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA810.1723734332106148No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGAAAGCCTGA770.16386116490391778No Hit
ACCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA750.15960503075056925No Hit
GCCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA750.15960503075056925No Hit
TCCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA750.15960503075056925No Hit
TCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA740.157476963673895No Hit
TCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA730.15534889659722073No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA710.15109276244387224No Hit
TCCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA700.14896469536719797No Hit
ACCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA700.14896469536719797No Hit
TCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA690.1468366282905237No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA680.14470856121384948No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA680.14470856121384948No Hit
TCCTACGGGGGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA680.14470856121384948No Hit
TCCTACGGGTGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA670.1425804941371752No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA650.1383243599838267No Hit
ACCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA650.1383243599838267No Hit
ACCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA640.13619629290715243No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA640.13619629290715243No Hit
TCCTACGGGGGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA630.13406822583047817No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA610.12981209167712968No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA610.12981209167712968No Hit
GCCTACGGGAGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA610.12981209167712968No Hit
GCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA610.12981209167712968No Hit
CCCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA600.1276840246004554No Hit
TCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA600.1276840246004554No Hit
GCCTACGGGGGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA600.1276840246004554No Hit
ACCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA600.1276840246004554No Hit
TCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA600.1276840246004554No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA590.12555595752378115No Hit
CCCTACGGGGTGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA590.12555595752378115No Hit
TCCTATGGGGCGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA590.12555595752378115No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA590.12555595752378115No Hit
ACCTACGGGGGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA580.12342789044710689No Hit
ACCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA580.12342789044710689No Hit
CCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA570.12129982337043263No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA570.12129982337043263No Hit
ACCTACGGGAGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA570.12129982337043263No Hit
GCCTACGGGGTGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA570.12129982337043263No Hit
TCCTACGGGAGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA560.11917175629375838No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA560.11917175629375838No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA560.11917175629375838No Hit
ACCTACGGGTGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA560.11917175629375838No Hit
GCCTACGGGACGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA560.11917175629375838No Hit
ACCTACGGGGGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA550.11704368921708413No Hit
CCCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA550.11704368921708413No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA550.11704368921708413No Hit
CCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.11491562214040987No Hit
GCCTACGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA540.11491562214040987No Hit
ACCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.11491562214040987No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA540.11491562214040987No Hit
ACCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA530.1127875550637356No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA530.1127875550637356No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGCGCAATGGGGGCAACCCTGA520.11065948798706135No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA520.11065948798706135No Hit
TCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA520.11065948798706135No Hit
ACCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA520.11065948798706135No Hit
GCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA510.10853142091038709No Hit
GCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA510.10853142091038709No Hit
CCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA510.10853142091038709No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA510.10853142091038709No Hit
TCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA510.10853142091038709No Hit
ACCTACGGGGTGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA500.10640335383371284No Hit
ACCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA500.10640335383371284No Hit
GCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA500.10640335383371284No Hit
GCCTACGGGTGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA500.10640335383371284No Hit
GCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA490.10427528675703858No Hit
GCCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA480.10214721968036433No Hit
CCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA480.10214721968036433No Hit
GCCTACGGGGGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA480.10214721968036433No Hit
TCCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA480.10214721968036433No Hit
TCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.10001915260369007No Hit
TCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.10001915260369007No Hit
TCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA470.10001915260369007No Hit
ACCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA470.10001915260369007No Hit
TCCTACGGGGCGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA470.10001915260369007No Hit
TCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA470.10001915260369007No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA470.10001915260369007No Hit
GCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.10001915260369007No Hit
GCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA470.10001915260369007No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)