FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25068
Sequences flagged as poor quality0
Sequence length321
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA14195.660603159406414No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA9263.6939524493378015No Hit
TCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA5162.0584011488750598No Hit
TCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA3821.523855114089676No Hit
TCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA3661.460028721876496No Hit
ACCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA3631.4480612733365248No Hit
GCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA3391.3523216850167545No Hit
TCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA3351.3363650869634596No Hit
TCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA3241.292484442316898No Hit
GCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA3021.2047231530237754No Hit
TCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2971.1847774054571567No Hit
ACCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2911.160842508377214No Hit
TCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2831.1289293122706239No Hit
TCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2751.097016116164034No Hit
ACCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2751.097016116164034No Hit
GCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2701.077070368597415No Hit
GCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2681.0690920695707675No Hit
GCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2561.0212222754108824No Hit
TCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2541.013243976384235No Hit
TCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2500.9972873783309398No Hit
TCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2480.9893090793042923No Hit
ACCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2480.9893090793042923No Hit
ACCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2430.9693633317376736No Hit
GCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2400.9573958831977023No Hit
GCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2380.9494175841710547No Hit
TCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2340.9334609861177597No Hit
ACCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2340.9334609861177597No Hit
TCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2320.9254826870911121No Hit
CCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2320.9254826870911121No Hit
GCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2320.9254826870911121No Hit
GCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2250.897558640497846No Hit
TCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2150.8576671453646083No Hit
ACCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2130.8496888463379608No Hit
CCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2100.8377213977979895No Hit
CCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2020.8058082016913994No Hit
ACCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA2010.8018190521780757No Hit
ACCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA2000.7978299026647518No Hit
CCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1960.7818733046114569No Hit
GCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1940.7738950055848093No Hit
TCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1940.7738950055848093No Hit
GCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1870.745970958991543No Hit
ACCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1840.7340035104515718No Hit
TCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1830.730014360938248No Hit
CCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1820.7260252114249242No Hit
CCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1820.7260252114249242No Hit
TCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1770.7060794638583054No Hit
CCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1730.6901228658050104No Hit
ACCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1730.6901228658050104No Hit
GCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1690.6741662677517153No Hit
CCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1630.6502313706717727No Hit
TCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1630.6502313706717727No Hit
TCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1620.646242221158449No Hit
GCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1610.6422530716451252No Hit
ACCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1590.6342747726184778No Hit
CCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1590.6342747726184778No Hit
GCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1590.6342747726184778No Hit
GCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1570.6262964735918303No Hit
CCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1510.6023615765118877No Hit
TCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1490.5943832774852401No Hit
ACCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1490.5943832774852401No Hit
CCCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1480.5903941279719164No Hit
CCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1480.5903941279719164No Hit
ACCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1470.5864049784585926No Hit
ACCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1460.5824158289452689No Hit
GCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1460.5824158289452689No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1390.5544917823520026No Hit
CCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1380.5505026328386788No Hit
ACCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1370.546513483325355No Hit
ACCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1330.53055688527206No Hit
TCCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1320.5265677357587363No Hit
CCCTACGGGTGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1310.5225785862454124No Hit
CCCTACGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1300.5185894367320887No Hit
ACCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1220.48667624062549864No Hit
GCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1190.47470879208552735No Hit
GCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1170.46673049305887987No Hit
CCCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1140.4547630445189086No Hit
CCCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1070.4268389979256422No Hit
ACCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1060.4228498484123185No Hit
TCCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1040.41487154938567095No Hit
CCCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1020.40689325035902346No Hit
CCCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA1010.4029041008456997No Hit
GCCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA1000.3989149513323759No Hit
CCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGA980.39093665230572844No Hit
ACCTACGGGGTGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA970.38694750279240464No Hit
ACCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA950.37896920376575716No Hit
GCCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA900.35902345619913834No Hit
ACCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA710.2832296154459869No Hit
CCCTACGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA700.27924046593266316No Hit
CCCTATGGGGCGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA620.2473272698260731No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA490.19546832615286422No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA460.18350087761289294No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA320.1276527844263603No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA320.1276527844263603No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGAAAGCCTGA310.12366363491303654No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA310.12366363491303654No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA280.11169618637306526No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA280.11169618637306526No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA270.1077070368597415No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA270.1077070368597415No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA260.10371788734641774No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA260.10371788734641774No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA260.10371788734641774No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)