FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33522
Sequences flagged as poor quality0
Sequence length321
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA13383.991408627170217No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4441.3245033112582782No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3531.053039794761649No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3481.0381242169321638No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3381.0082930612731937No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3270.9754787900483265No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3200.9545969810870473No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3030.9038840164667981No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2880.8591372829783426No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2790.8322892428852693No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2650.7905256249627111No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2510.7487620070401527No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2470.7368295447765646No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2460.7338464292106676No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2430.7248970825129766No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2380.7099815046834914No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2350.7010321579858003No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2320.6920828112881093No Hit
GCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA2310.6890996957222123No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2210.6592685400632421No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2180.650319193365551No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2180.650319193365551No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2120.6324204999701688No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2040.6085555754429927No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2030.6055724598770956No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2000.5966231131794046No Hit
GCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA1980.5906568820476106No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1890.5638088419545374No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1880.5608257263886404No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA1810.5399439174273611No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1790.5339776862955671No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1760.525028339597876No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1680.5011634150706998No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1640.4892309528071117No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1610.48028160610942067No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA1600.47729849054352363No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1590.4743153749776266No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1590.4743153749776266No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1530.45641668158224447No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1340.3997374858302011No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1320.393771254698407No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1270.3788556768689219No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1250.37288944573712784No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1230.3669232146053338No Hit
GCCTACGGGAGGCTGCAGTCGGGAATATTGCGCAATGGAGGAAACTCTGA1220.36394009903943675No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA1210.36095698347353977No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA1050.3132271344191874No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA1020.30427778772149633No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1010.3012946721555993No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1000.2983115565897023No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGA930.27742974762842315No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA870.25953105423304096No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA820.24461547640355585No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA790.2356661297058648No Hit
TCCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA740.22075055187637968No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA740.22075055187637968No Hit
TCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA740.22075055187637968No Hit
TCCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA730.21776743631048268No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA700.2088180896127916No Hit
TCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA700.2088180896127916No Hit
GCCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA670.19986874291510054No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGGGGAACCCTGA670.19986874291510054No Hit
TCCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA650.1939025117833065No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA600.17898693395382137No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGAAAGCCTGA580.17302070282202733No Hit
TCCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA580.17302070282202733No Hit
TCCTATGGGGCGCTGCAGTCGGGAATATTGCGCAATGGAGGAAACTCTGA570.1700375872561303No Hit
GCCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA570.1700375872561303No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA560.16705447169023327No Hit
TCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA550.16407135612433627No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA550.16407135612433627No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA540.16108824055843923No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.16108824055843923No Hit
ACCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA540.16108824055843923No Hit
ACCTATGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA520.1551220094266452No Hit
ACCTATGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA500.14915577829485116No Hit
GCCTACGGGTGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA490.14617266272895413No Hit
GCCTACGGGGGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA490.14617266272895413No Hit
TCCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA490.14617266272895413No Hit
ACCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA490.14617266272895413No Hit
GCCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA490.14617266272895413No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA490.14617266272895413No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGA490.14617266272895413No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGAGGAAACTCTGA480.1431895471630571No Hit
GCCTACGGGAGGCTGCAGGCGCGAAACCTCCGCAATGTGAGAAATCGCGA480.1431895471630571No Hit
TCCTACGGGGCGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA470.1402064315971601No Hit
TCCTACGGGGTGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA470.1402064315971601No Hit
ACCTACGGGGCGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA470.1402064315971601No Hit
GCCTACGGGTGGCTGCAGTCGGGAATATTGCGCAATGGAGGAAACTCTGA470.1402064315971601No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA470.1402064315971601No Hit
GCCTACGGGAGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA460.13722331603126303No Hit
CCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA460.13722331603126303No Hit
TCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA450.13424020046536603No Hit
GCCTACGGGAGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA440.131257084899469No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGA440.131257084899469No Hit
GCCTACGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA440.131257084899469No Hit
ACCTACGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA440.131257084899469No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA440.131257084899469No Hit
GCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA440.131257084899469No Hit
TCCTACGGGAGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA430.12827396933357196No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA430.12827396933357196No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA430.12827396933357196No Hit
ACCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA430.12827396933357196No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA430.12827396933357196No Hit
TCCTACGGGTGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA420.12529085376767496No Hit
CCCTACGGGTGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA420.12529085376767496No Hit
ACCTACGGGTGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA420.12529085376767496No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA420.12529085376767496No Hit
TCCTACGGGGGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA420.12529085376767496No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA410.12230773820177793No Hit
TCCTATGGGGCGCTGCAGTGGGGAATCTTGCGCAATGGGGGGAACCCTGA410.12230773820177793No Hit
GCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA410.12230773820177793No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA410.12230773820177793No Hit
TCCTACGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA410.12230773820177793No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA400.11932462263588091No Hit
TCCTACGGGTGGCTGCAGTCGGGAATATTGCGCAATGGAGGAAACTCTGA400.11932462263588091No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGGGAAACCCTGA400.11932462263588091No Hit
GCCTACGGGGGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA400.11932462263588091No Hit
GCCTACGGGGGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA400.11932462263588091No Hit
GCCTACGGGGGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA400.11932462263588091No Hit
TCCTACGGGGTGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA400.11932462263588091No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA400.11932462263588091No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA390.11634150706998389No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA390.11634150706998389No Hit
TCCTACGGGGGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA390.11634150706998389No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA380.11335839150408687No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA380.11335839150408687No Hit
ACCTACGGGTGGCAGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA380.11335839150408687No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA370.11037527593818984No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA370.11037527593818984No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA370.11037527593818984No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA370.11037527593818984No Hit
ACCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA360.10739216037229282No Hit
TCCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA360.10739216037229282No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA360.10739216037229282No Hit
TCCTACGGGAGGCAGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA360.10739216037229282No Hit
GCCTACGGGTGGCAGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA360.10739216037229282No Hit
GCCTACGGGGGGCAGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA360.10739216037229282No Hit
GCCTATGGGGCGCTGCAGTCGGGAATATTGCGCAATGGAGGAAACTCTGA360.10739216037229282No Hit
ACCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA350.1044090448063958No Hit
CCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA350.1044090448063958No Hit
TCCTACGGGAGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA350.1044090448063958No Hit
GCCTACGGGGGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA350.1044090448063958No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA350.1044090448063958No Hit
GCCTACGGGTGGCAGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA350.1044090448063958No Hit
TCCTACGGGGGGCTGCAGTGGGGGATATTGCGCAATGGGGGCAACCCTGA350.1044090448063958No Hit
ACCTACGGGGGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA350.1044090448063958No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA340.10142592924049879No Hit
ACCTACGGGGGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA340.10142592924049879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)