FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008092659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008092659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29297
Sequences flagged as poor quality0
Sequence length321
%GC54

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA17626.0142676724579305No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA6292.1469775062293066No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4911.6759395159913986No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4771.6281530532136397No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA4341.4813803461105233No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4341.4813803461105233No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4331.4779670273406833No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4281.4609004334914837No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA4141.4131139707137248No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3911.3346076390074069No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3861.3175410451582075No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3541.20831484452333No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3351.1434617878963718No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3321.1332218315868519No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3191.088848687578933No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3091.054715499880534No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3071.047888862340854No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2951.006929037102775No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2931.0001023995630953No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2910.9932757620234154No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2900.9898624432535754No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2860.9762091681742158No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2820.9625558930948561No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2810.9591425743250162No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2790.9523159367853364No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2780.9489026180154965No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2650.9045294740075775No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2540.8669829675393386No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2510.8567430112298188No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA2400.8191965047615798No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2390.8157831859917398No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2320.7918899546028604No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2230.7611700856743011No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2210.7543434481346213No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2150.7338635355155818No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2080.7099703041267025No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1900.6485305662695839No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1830.6246373348807045No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1810.6178106973410247No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1800.6143973785711848No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1680.5734375533331058No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1610.5495443219442264No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA1500.5119978154759873No Hit
TCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1430.4881045840871079No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1400.47786462777758815No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1180.40277161484111No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1150.3925316585315902No Hit
TCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1080.3686384271427109No Hit
ACCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1050.3583984708331911No Hit
TCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1040.35498515206335124No Hit
ACCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA1010.34474519575383145No Hit
TCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA980.3345052394443117No Hit
GCCTACGGGAGGCTGCAGTGGGGGATATTGCGCAATGGGGGAAACCCTGA960.3276786019046319No Hit
GCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA950.32426528313479197No Hit
TCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA950.32426528313479197No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA910.3106120080554323No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA910.3106120080554323No Hit
TCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA890.30378537051575244No Hit
ACCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA850.2901320954363928No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA850.2901320954363928No Hit
GCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA840.2867187766665529No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA800.2730655015871932No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA760.2594122265078336No Hit
ACCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA750.25599890773799366No Hit
GCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA750.25599890773799366No Hit
GCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA740.25258558896815375No Hit
TCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA720.2457589514284739No Hit
GCCTACGGGAGGCTGCAGTGGGGAATTTTGCGCAATGGGGGAAACCCTGA690.2355189951189542No Hit
CCCTACGGGAGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA690.2355189951189542No Hit
GCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA690.2355189951189542No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA670.2286923575792743No Hit
CCCTATGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA660.22527903880943442No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA660.22527903880943442No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA660.22527903880943442No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA650.22186572003959448No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA650.22186572003959448No Hit
CCCTACGGGTGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA640.2184524012697546No Hit
GCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA620.21162576373007477No Hit
GCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA610.20821244496023483No Hit
ACCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA600.20479912619039495No Hit
TCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA590.201385807420555No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA570.19455916988087518No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA560.19114585111103527No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA550.18773253234119536No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA540.18431921357135544No Hit
ACCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA540.18431921357135544No Hit
CCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA530.18090589480151553No Hit
CCCTACGGGGCGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA530.18090589480151553No Hit
GCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA530.18090589480151553No Hit
TCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA490.16725261972215585No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA490.16725261972215585No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA490.16725261972215585No Hit
CCCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.16042598218247603No Hit
ACCTACGGGGGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.16042598218247603No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA470.16042598218247603No Hit
TCCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA470.16042598218247603No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA470.16042598218247603No Hit
GCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA460.15701266341263612No Hit
TCCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA450.1535993446427962No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA450.1535993446427962No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA440.15018602587295626No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA440.15018602587295626No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA430.14677270710311635No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA430.14677270710311635No Hit
ACCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA430.14677270710311635No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA430.14677270710311635No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA430.14677270710311635No Hit
ACCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA420.14335938833327644No Hit
GCCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA420.14335938833327644No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA410.13994606956343653No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA400.1365327507935966No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA400.1365327507935966No Hit
GCCTACGGGAGGCTGCAGTAGGGAATTTTCGGCAATGGGGGAAACCCTGA400.1365327507935966No Hit
GCCTACGGGACGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA400.1365327507935966No Hit
CCCTACGGGGTGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA400.1365327507935966No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA390.1331194320237567No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA380.1297061132539168No Hit
CCCTACGGGGGGCTGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA380.1297061132539168No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA360.12287947571423695No Hit
TCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA360.12287947571423695No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA360.12287947571423695No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA360.12287947571423695No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA360.12287947571423695No Hit
ACCTATGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA350.11946615694439704No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGA350.11946615694439704No Hit
CCCTACGGGTGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA350.11946615694439704No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGA340.11605283817455712No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA340.11605283817455712No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA320.1092262006348773No Hit
TCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA320.1092262006348773No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA320.1092262006348773No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA320.1092262006348773No Hit
ACCTACGGGGCGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGA320.1092262006348773No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA310.10581288186503739No Hit
GCCTACGGGTGGCTGCAGTGGGGGATATTGCGCAATGGGGGAAACCCTGA310.10581288186503739No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA310.10581288186503739No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA300.10239956309519747No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA300.10239956309519747No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA300.10239956309519747No Hit
ACCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA300.10239956309519747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)