FastQCFastQC Report
Wed 28 Jun 2023
EGAF00008093029

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008093029
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19953
Sequences flagged as poor quality0
Sequence length321
%GC53

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA12846.435122537964216No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3691.8493459630130809No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3401.7040044103643563No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA3161.5837217461033428No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2811.4083095273893649No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2781.3932741943567384No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2701.3531799729364005No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2651.3281210845486895No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2611.3080739738385205No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2571.2880268631283518No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2551.2780033077732673No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2321.162732421189796No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2281.142685310479627No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2251.1276499774470004No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2221.1126146444143736No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2171.0875557560266627No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2091.047461534606325No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2051.027414423896156No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2021.0123790908635293No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA2021.0123790908635293No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1930.9672730917656494No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1870.9372024257003959No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1850.9271788703453114No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1850.9271788703453114No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1840.9221670926677692No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1830.917155314990227No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA1830.917155314990227No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1780.8920964266025159No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1740.8720493158923471No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1720.8620257605372627No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1690.8469904275046359No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1560.7818373176965869No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1550.7768255400190448No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1530.7668019846639603No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1530.7668019846639603No Hit
CCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1520.7617902069864181No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA1480.7417430962762492No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1360.6816017641457425No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1250.6264722096927781No Hit
GCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA1220.6114368766601513No Hit
CCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1110.5563073222071868No Hit
TCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1080.5412719891745602No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA1050.5262366561419336No Hit
GCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA930.46609532401142684No Hit
CCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA850.4260011025910891No Hit
GCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA850.4260011025910891No Hit
ACCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA780.39091865884829347No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGA760.38089510349320904No Hit
TCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA640.3207537713627024No Hit
CCCTACGGGGCGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGA620.3107302160076179No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA620.3107302160076179No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA570.28567132761990677No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGA530.2656242169097379No Hit
TCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA520.2606124392321957No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA520.2606124392321957No Hit
TCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA520.2606124392321957No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA510.25560066155465344No Hit
GCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA500.2505888838771112No Hit
ACCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA490.24557710619956902No Hit
TCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA480.24056532852202678No Hit
GCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA480.24056532852202678No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA460.2305417731669423No Hit
ACCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA450.2255299954894001No Hit
ACCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA440.22051821781185785No Hit
GCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA440.22051821781185785No Hit
TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA430.21550644013431566No Hit
ACCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA420.21049466245677342No Hit
GCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA420.21049466245677342No Hit
ACCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA410.20548288477923118No Hit
TCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA400.20047110710168897No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA390.19545932942414673No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA390.19545932942414673No Hit
GCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA380.19044755174660452No Hit
TCCTACGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA380.19044755174660452No Hit
CCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA370.1854357740690623No Hit
TCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA370.1854357740690623No Hit
ACCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA360.18042399639152007No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGA360.18042399639152007No Hit
GCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA350.17541221871397783No Hit
TCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA350.17541221871397783No Hit
ACCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA350.17541221871397783No Hit
CCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA350.17541221871397783No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA350.17541221871397783No Hit
GCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA340.17040044103643562No Hit
GCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA340.17040044103643562No Hit
GCCTACGGGAGGCTGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGA330.1653886633588934No Hit
GCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA330.1653886633588934No Hit
GCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA330.1653886633588934No Hit
ACCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA320.1603768856813512No Hit
CCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA320.1603768856813512No Hit
TCCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA320.1603768856813512No Hit
TCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA320.1603768856813512No Hit
ACCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA320.1603768856813512No Hit
GCCTACGGGAGGCTGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGA310.15536510800380895No Hit
CCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA300.15035333032626672No Hit
ACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA300.15035333032626672No Hit
TCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA300.15035333032626672No Hit
ACCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA300.15035333032626672No Hit
GCCTATGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA290.1453415526487245No Hit
ACCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA290.1453415526487245No Hit
CCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA290.1453415526487245No Hit
CCCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA280.14032977497118226No Hit
ACCTACGGGGGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA280.14032977497118226No Hit
GCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA280.14032977497118226No Hit
TCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA280.14032977497118226No Hit
CCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA280.14032977497118226No Hit
GCCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA280.14032977497118226No Hit
TCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA270.13531799729364005No Hit
TCCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA270.13531799729364005No Hit
GCCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA270.13531799729364005No Hit
CCCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA270.13531799729364005No Hit
CCCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA270.13531799729364005No Hit
ACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA260.13030621961609784No Hit
TCCTATGGGGCGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA260.13030621961609784No Hit
CCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA260.13030621961609784No Hit
TCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA260.13030621961609784No Hit
TCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA260.13030621961609784No Hit
ACCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA260.13030621961609784No Hit
TCCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA260.13030621961609784No Hit
GCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA260.13030621961609784No Hit
ACCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA250.1252944419385556No Hit
ACCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA250.1252944419385556No Hit
ACCTACGGGGTGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA250.1252944419385556No Hit
TCCTACGGGTGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA250.1252944419385556No Hit
ACCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA250.1252944419385556No Hit
GCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA250.1252944419385556No Hit
TCCTACGGGGGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA240.12028266426101339No Hit
TCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA240.12028266426101339No Hit
GCCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA240.12028266426101339No Hit
CCCTACGGGGGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA230.11527088658347115No Hit
GCCTACGGGTGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA230.11527088658347115No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGA230.11527088658347115No Hit
CCCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA230.11527088658347115No Hit
TCCTACGGGAGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA230.11527088658347115No Hit
TCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA230.11527088658347115No Hit
TCCTATGGGGCGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGA230.11527088658347115No Hit
GCCTACGGGAGGCTGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGA230.11527088658347115No Hit
GCCTACGGGGCGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA230.11527088658347115No Hit
TCCTACGGGGTGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA230.11527088658347115No Hit
ACCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA230.11527088658347115No Hit
ACCTACGGGGGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA220.11025910890592892No Hit
TCCTACGGGAGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA220.11025910890592892No Hit
ACCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA220.11025910890592892No Hit
GCCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA220.11025910890592892No Hit
ACCTACGGGTGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA220.11025910890592892No Hit
ACCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA220.11025910890592892No Hit
TCCTACGGGGTGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGA210.10524733122838671No Hit
CCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA210.10524733122838671No Hit
GCCTACGGGGGGCTGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA210.10524733122838671No Hit
ACCTACGGGTGGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA210.10524733122838671No Hit
ACCTACGGGAGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA210.10524733122838671No Hit
TCCTACGGGTGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGA210.10524733122838671No Hit
GCCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA210.10524733122838671No Hit
CCCTACGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA210.10524733122838671No Hit
TCCTACGGGGTGCAGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA210.10524733122838671No Hit
CCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA210.10524733122838671No Hit
TCCTATGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGA200.10023555355084449No Hit
ACCTACGGGTGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA200.10023555355084449No Hit
TCCTACGGGGGGCAGCAGTCGAGAATCATTCACAATGGGGGAAACCCTGA200.10023555355084449No Hit
ACCTATGGGGCGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGA200.10023555355084449No Hit
ACCTATGGGGCGCTGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGA200.10023555355084449No Hit
CCCTACGGGAGGCTGCAGTGAGGAATATTGGTCAATGGACGGAAGTCTGA200.10023555355084449No Hit
TCCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGA200.10023555355084449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)