FastQCFastQC Report
Thu 6 Jul 2023
EGAF00008093169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008093169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505148700
Sequences flagged as poor quality0
Sequence length150
%GC22

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATG19718730.39035495884677124TruSeq Adapter, Index 12 (100% over 49bp)
TCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTA5259280.10411350162833242TruSeq Adapter, Index 12 (100% over 47bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)