FastQCFastQC Report
Fri 4 Aug 2023
EGAF00008101681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008101681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21122340
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGAC1002850.47478167665135584No Hit
GGGGATGAAAAATTATAGCCAAGCATAATATAGCAAGGACTAACCCCTATA632040.29922821051076726No Hit
GGCGATGAAAAATTATAGCCAAGCATAATATAGCAAGGACTAACCCCTATA529120.25050254848657866No Hit
GGCAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGC461320.21840383215117268No Hit
GGGCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACC407810.1930704647307069No Hit
GGCTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC404210.19136610811112784No Hit
GGGCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACAC362700.1717139294225924No Hit
GGCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACT328410.15547993262110166No Hit
GGGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGC325140.15393180869165063No Hit
GGCCCCCCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTT319890.15144628862143114No Hit
GGGTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC317750.15043314329757024No Hit
GGCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCT295080.13970043091816534No Hit
GGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCC276120.1307241527217155No Hit
GGCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCG273600.12953110308801014No Hit
GGCCTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTG269170.1274337975811392No Hit
GGCCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCC246950.11691412977918167No Hit
CGCCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGAC243530.11529499099058153No Hit
CGGGATGAAAAATTATAGCCAAGCATAATATAGCAAGGACTAACCCCTATA239610.11343913600481764No Hit
GGGCACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGA226100.10704306435745281No Hit
GGGCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT226040.10701465841379318No Hit
GGGACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTCGTTC218270.10333608870986832No Hit
GGGCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACT215450.1020010093578647No Hit
GGCCCCCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTC213690.10116776834384826No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)