FastQCFastQC Report
Fri 4 Aug 2023
EGAF00008101682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008101682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38371623
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA3538810.9222466300161449No Hit
GGCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA2853130.743552077533963No Hit
GGCCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCC1478760.38537853871857336No Hit
CGGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA1294170.337272676738224No Hit
GGCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCG1194670.3113420560813912No Hit
GGGACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTCGTTC1105930.288215590985036No Hit
GGGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT1072530.2795112419404308No Hit
GGGCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT997250.25989257738720095No Hit
GGCCCCCTTGTAAATTTAACTGTTAATCCAAAGAGGAACAGCTCTTTGGAC990420.258112616190355No Hit
GGCCCCCCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTT962390.2508077388334603No Hit
GGCATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC857190.22339164543548234No Hit
GGCAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT845770.22041548776813533No Hit
GGCAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGC719800.18758654018882653No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAG709220.18482929429385878No Hit
GGCCCCCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTC679340.17704228981922396No Hit
GGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC639400.1666335562610943No Hit
GGCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGT592960.15453086255955345No Hit
GGCAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA565640.1474110177721698No Hit
GGCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT560270.14601154608445935No Hit
GCCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA554520.14451304288067252No Hit
CGCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA543250.14157597660125035No Hit
GGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCC524340.13664785563018797No Hit
GGGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGC522160.13607972745901314No Hit
GGGGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTA520520.13565232828436785No Hit
GGGAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA505660.13177967478727703No Hit
GGCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTC484740.12632772921802135No Hit
GCGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA457320.11918182350535446No Hit
GGGCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACC453080.11807684027334471No Hit
GGGAAGATAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAA443130.11548377820766144No Hit
GGGATAACTGAACTCCTCACACCCAATTGGACCAATCTATCACCCTATAGA441140.11496516579452477No Hit
GGGGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCC435940.11360999767979582No Hit
GGCCCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGG432000.11258319722363581No Hit
CGGCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT428240.11160330643298566No Hit
GGCTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC421150.10975558683040329No Hit
CGGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT413370.10772804684336652No Hit
GGGCGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTC405120.10557802050749847No Hit
GGCCTTGTAAATTTAACTGTTAATCCAAAGAGGAACAGCTCTTTGGACACT400990.10450170429330029No Hit
GGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC398300.10380066540318089No Hit
GGGAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCCTTGTAAA396050.1032142945843078No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)