FastQCFastQC Report
Fri 4 Aug 2023
EGAF00008101683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008101683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35012940
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA3775101.078201373549322No Hit
GGCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA3163060.9033974296360145No Hit
GGCCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGAC1671180.4773035340648343No Hit
GGCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCG1628410.4650880503036877No Hit
GGCCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCC1586080.45299823436706543No Hit
CGGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA1409140.40246263238676905No Hit
GGGCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT1150570.3286127928702931No Hit
GGGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT1067820.3049786735989608No Hit
GGCATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC917750.26211737717541No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAG880610.2515098703507903No Hit
GGCAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT864830.24700296518944137No Hit
GGGACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTCGTTC798170.22796428977400923No Hit
GGCAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGC718740.2052783913604513No Hit
GGCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGT716810.20472716658469697No Hit
GGGGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTA698430.19947767882388623No Hit
GGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC668890.1910407980592318No Hit
GGCTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC663710.18956134503415023No Hit
GCCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA661580.18895299851997574No Hit
CGCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA645420.18433756205562857No Hit
GGCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT599490.1712195548274438No Hit
GGCAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA597470.1706426252694004No Hit
GGCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCT589590.16839202877564693No Hit
GGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCC586730.16757518791623896No Hit
GGGTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC582690.16642132880015217No Hit
GCGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA546150.1559851871907929No Hit
GGGAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA530940.15164107898394136No Hit
GGGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGC524790.1498845855275221No Hit
CGGCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT504340.14404388777406296No Hit
GGCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTC502550.14353264821520273No Hit
GGGCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACAC493340.14090219216095534No Hit
GGCCCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTA488530.139528414351951No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTG472700.13500722875599708No Hit
GGCCCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGG471060.13453883050095192No Hit
GGGCACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGA470010.1342389413742462No Hit
GGCCCCCCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTT450400.12863815492215164No Hit
GGGCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCT441280.12603340365019333No Hit
GGCCTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTG433210.12372854150494075No Hit
CCGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA425000.12138369414279407No Hit
GGGTAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCC419220.11973287590245206No Hit
CGGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT418100.1194129941672993No Hit
CGCCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGAC417310.11918736330053974No Hit
GGGATAACTGAACTCCTCACACCCAATTGGACCAATCTATCACCCTATAGA413570.11811918679208316No Hit
GGCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACT405290.11575434682148941No Hit
GGGCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACC403840.11534021421794342No Hit
GGGGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCC403430.11522311465418213No Hit
GCCCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGAC394270.1126069390345398No Hit
GGGCGTTCAAGCTCAACACCCACTACCTAAAAAATCCCAAACATATAACTG390140.11142737513616394No Hit
CGCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCG375680.10729747344838793No Hit
GGGCTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTG360530.10297050176306245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)