FastQCFastQC Report
Fri 4 Aug 2023
EGAF00008101686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008101686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8083469
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA4327905.3540132336748No Hit
GGCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA3150093.896953152167714No Hit
GGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC2196592.7173853205845164No Hit
GGGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT1120161.385741690850797No Hit
CGGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA1099601.3603070661865593No Hit
GGCAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT797590.9866927181881937No Hit
GGGGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACC741770.9176382070618444No Hit
GGCGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC691160.8550289485863063No Hit
GGGCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGAC582620.7207549135154722No Hit
GGGAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA580500.7181322771201325No Hit
GGCAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA579740.717192086714256No Hit
CGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC573590.7095839669824923No Hit
GCCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA550360.6808463049712938No Hit
GGCCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGAC538160.6657537747716977No Hit
GGGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCC480870.5948807374655609No Hit
GCGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA473750.5860726378736654No Hit
GGCCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCC465740.5761635258327829No Hit
CGCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA450790.557668990875081No Hit
GGCATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC435310.5385187968185441No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAG412010.5096945383225939No Hit
GGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC386240.47781466100754516No Hit
GGGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTA377480.46697772948717936No Hit
GGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCT366760.45371609639376365No Hit
CCGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA348030.43054535125946547No Hit
GGGGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCC334340.4136095530272956No Hit
CGGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT321560.39779950909689893No Hit
GGGCGAATGATTAGAGGTCTTGGGGCCGAAACGATCTCAACCTATTCTCAA315380.39015427658595586No Hit
CGGGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACC229810.2842962594400993No Hit
GCGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC229100.28341792366618834No Hit
GGGACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTCGTTC224240.2774056534391361No Hit
GGCAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCT220490.2727665560417192No Hit
GGGGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACT209930.2597028577705933No Hit
CGGCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGAC192880.2386104282703379No Hit
GGCGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCC188710.23345175196441031No Hit
GGGAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAAT183230.22667248430098516No Hit
GGCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCG179100.22156329170063002No Hit
GGCCGAATGATTAGAGGTCTTGGGGCCGAAACGATCTCAACCTATTCTCAA170770.21125831001516798No Hit
GGGGAATGATTAGAGGTCTTGGGGCCGAAACGATCTCAACCTATTCTCAAA166010.20536974905204686No Hit
CCGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC156160.19318438655483186No Hit
CGGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCC152830.18906486806592565No Hit
CGGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTA150960.18675150483041378No Hit
GGCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACT149160.1845247380796537No Hit
CGGAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTA148150.1832752745139494No Hit
GGCCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTA142010.1756795257085788No Hit
GGGAGAGGTCTTGGGGCCGAAACGATCTCAACCTATTCTCAAACTTTAAAT139060.17203010242261088No Hit
CGGCGAATGATTAGAGGTCTTGGGGCCGAAACGATCTCAACCTATTCTCAA132600.16403848397266074No Hit
GGCCCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGG129240.15988185270457522No Hit
GGGGGGTTGGGACGCGGCGGCCGGCGGGCGGTGGGTGTGCGCGCCCGGCGC124350.15383246969834363No Hit
GGCCCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGA117950.14591507680675214No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTG117760.14568002920528303No Hit
CGGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATAC115640.14305739280994337No Hit
GGCAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAAT112320.13895024524743027No Hit
GCGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT109850.1358946264283317No Hit
CGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCT104290.1290163913537616No Hit
CGCAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT101050.12500821120239342No Hit
CCCGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATA100040.12375874763668915No Hit
GGGGATCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGC93780.11601454771460123No Hit
CGCCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGAC86610.10714459349074018No Hit
CGGGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCC84650.10471989191769028No Hit
GGCGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACC84400.10441061875786249No Hit
GCCGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCC84370.10437350597868315No Hit
CCGAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTAT83800.1036683631742758No Hit
GGGGAAACGATCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGG83080.10277765647397176No Hit
GGGGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAA82270.10177561143612972No Hit
GGCGAATGATTAGAGGTCTTGGGGCCGAAACGATCTCAACCTATTCTCAAA82030.10147870920269504No Hit
GGGGAGTCGGGGGAGGATCCCGCCGGGCCGGGCCCGGCGTCCCAGCGGGTT81890.10130551623319148No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)