FastQCFastQC Report
Fri 4 Aug 2023
EGAF00008101707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008101707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38557511
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCC1069060.277263747652176No Hit
GGCCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGAC904340.2345431477669811No Hit
GGGTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC874220.22673144021148045No Hit
GGCTCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC818160.21219211997371926No Hit
GGCCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGCCCCC711760.18459697774578862No Hit
GGGCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACAC698560.1811735202513461No Hit
GGGGATGAAAAATTATAGCCAAGCATAATATAGCAAGGACTAACCCCTATA678620.17600202461201397No Hit
GGGCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCT615380.15960055097954845No Hit
GGGCGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTC542250.1406340777546559No Hit
GGCCCCCCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTT533530.13837252098559993No Hit
GGCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCG533070.13825321867897541No Hit
GGGCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAG518250.13440960958294224No Hit
GGGCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACC517690.1342643719922689No Hit
GGCCCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCC486310.12612587985775325No Hit
GGCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACT448780.116392367754236No Hit
CGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCC436190.1131271154924912No Hit
GGCGATGAAAAATTATAGCCAAGCATAATATAGCAAGGACTAACCCCTATA431630.11194446653986562No Hit
GGGCAATTAAGAAAGCGTTCAAGCTCAACACCCACTACCTAAAAAATCCCA419130.10870255603376473No Hit
GGGCACCGCGACGCGGCGCGTGCGCGGGCGGGGCCCGCGTGCCCGTTCGTT414470.10749397179709032No Hit
GGCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGT402100.10428577716025289No Hit
GGGCACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGA402020.10426502893301386No Hit
GGCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCT396180.10275040834456352No Hit
GGCCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCC386300.1001880022805414No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)