FastQCFastQC Report
Sun 9 Jul 2023
EGAF00008101925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008101925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83383309
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA1044840.12530565319733233No Hit
CGTTCGTTATCGGAATTAACCAGACA958070.11489949385433959No Hit
GCTGCGGATATGGGTACGGCCCGGCG872870.10468162159407705No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)