FastQCFastQC Report
Mon 10 Jul 2023
EGAF00008102008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008102008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125376807
Sequences flagged as poor quality0
Sequence length90
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGGTC2244261517.9001328371682No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC66114605.273271953719479No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGGTCT47687743.8035535551643136No Hit
CTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGGTCTTC39909503.1831644907020165No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC31548322.516280383500275No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC30572342.438436640039812No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC15364231.2254443519206866No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGTTTC13683911.0914227541302755No Hit
TCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGGTCTT6913050.5513818835727727No Hit
CTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGGTCTTCCT6266010.49977425250588814No Hit
TCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGGTCTTCC3708350.2957763950712192No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT3669740.29269687813951106No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTTGGCTTC3046820.24301304785980077No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGTTTCA2643960.2108811081781657No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC2432260.19399600757100155No Hit
CTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGTTTCACA2177650.17368842388847885No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT1840810.14682221090540293No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGAGTTCC1751530.13970127664839957No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATACGGATGA1731230.13808215741209617No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGTTGC1559510.12438584434519855No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCTTGGAAA1395120.11127416891387257No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATCAGGCCAG1350420.10770891621127343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)